Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 107 2e-18
seq63578 96.9 3e-15
>seq28572
Length=14732
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||||||||| || |||||||| || |||||||||| | ||||| |||| ||
Sbjct 3219 ACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCG 3278
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|| ||||| || || || |||| || || || || | ||||| | ||||| | | ||
Sbjct 3279 AGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTAT-CTTG 3337
Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||| | ||| | || | | ||| || |||| ||| || || | ||||| |||||
Sbjct 3338 AATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTT 3397
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||| ||||| ||||| || || |||||||||
Sbjct 3398 ACCAGTCAACGTTTTTACGAAGATCTGCATT 3428
Score = 104 bits (114), Expect = 2e-17
Identities = 165/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 35500 CTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559
|| || ||| |||||||| | | |||||||||||| | ||| ||| || || || ||
Sbjct 1595 CTATTAATTGCCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATT 1654
Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619
|||||| | | |||| | || || |||||||| || || || || || || |||||
Sbjct 1655 GTAATCCGAAAGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTG 1714
Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCT 35679
|| | ||| | | || ||||| |||||| ||| | || | | ||||||||
Sbjct 1715 ATCGGGAGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCT 1774
Query 35680 CGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| ||| || || | || ||||||||||| ||||| || || || || || |||||
Sbjct 1775 AGGTTCGACTTCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||||||||| || || ||||| ||||||||||||| | ||||| |||| ||
Sbjct 2535 ACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCG 2594
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|| || ||||| || || || || || || || || | |||| | |||||| ||| ||
Sbjct 2595 AGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCC-TG 2653
Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||| | ||| | | || | | ||||| || | || || || | ||||| |||||
Sbjct 2654 AATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTT 2713
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| || || ||||| || || ||||||||
Sbjct 2714 ACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||||||||| ||| || ||||| ||||| || || | | |||| | || ||
Sbjct 2991 ACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCG 3050
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|| || ||||| || || |||| || |||||||||| ||| | || || || ||| ||
Sbjct 3051 AGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCC-TG 3109
Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||||| ||| | || | | ||||||||| | || || || | ||||| |||||
Sbjct 3110 AATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTT 3169
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || ||||| || || ||||||||
Sbjct 3170 GCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||| | |||||| || ||||||||||| |||||||||| | |||||| | || ||
Sbjct 2078 CACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCTTC 2137
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| || || || ||||| || || || || || || | |||| | ||||| ||
Sbjct 2138 GAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCTTG 2197
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||| || ||| | || | | ||||| || | || || || | ||||| |||||
Sbjct 2198 GATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTT 2257
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | ||||| || || || |||||
Sbjct 2258 ACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
>seq63578
Length=26733
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||||||||| || | ||||| || | || || || |||||||| |||||
Sbjct 11592 TTCCACCACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCAC 11651
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || |||| ||| ||||| ||||| ||||| || |||||||| | |
Sbjct 11652 TCAGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTG 11711
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
| | || || || ||| ||| ||| || || | | || | | || ||| || ||||
Sbjct 11712 GTATGCCTTCTTTATCC-TGAATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCC 11770
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| || || ||||| || || | ||||| || || || |||||
Sbjct 11771 ACCTCCAAGGTTATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||||| | ||| || ||||| | |||| ||| || ||||||||||| ||| |
Sbjct 12050 CCACCACGTAGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTC 12109
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || | || ||||| || || || || | |||||||| | ||
Sbjct 12110 AAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGG 12169
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | || || || ||| |||||| || | | || | | ||||| | ||| ||
Sbjct 12170 ATACCTTCTTTATCTTGGAT-TTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGAC 12228
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | |||||| ||||| || || | ||||| || || || |||||||
Sbjct 12229 TTCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCATTC 12278
Score = 82.4 bits (90), Expect = 7e-11
Identities = 160/234 (68%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565
|| ||| ||||| | | ||| |||||||| | || |||||| ||||| || |||||
Sbjct 11362 ATGTCCGCCACGAAGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATC 11421
Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625
| || || || | || |||| ||||| || || || ||||| | ||||||||| |
Sbjct 11422 GCTTAACGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGG 11481
Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATT 35684
|| | | || || || ||| ||| |||| ||| | | || ||| || ||
Sbjct 11482 CGGGATACCTTCTTTATCT-TGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTT 11540
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| || |||| || || || || || || ||||||||||| || || |||||||
Sbjct 11541 CGACTTCCAAGGTAATAGTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCATTC 11594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450340631320880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |