Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 152 5e-32
seq63578 140 3e-28
seq52934 102 8e-17
>seq28572
Length=14732
Score = 152 bits (168), Expect = 5e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| | ||| | |||||| |||| || |||||||||||||| ||||| |||
Sbjct 2061 CCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAG 2120
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || ||||| |||||||| |||||||| ||||| || ||||| || ||
Sbjct 2121 AGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGA 2180
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| ||||| ||||| || | ||||| | || ||
Sbjct 2181 ATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACT 2240
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| ||||||||||| |||| ||||||||||| ||||||||
Sbjct 2241 TCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||||||| || | || | |||| || ||||| ||||| ||||| |||||
Sbjct 2971 TTCCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCG 3030
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| || | || ||||| ||||| || || ||||||| ||| ||||| || || |
Sbjct 3031 AAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAG 3090
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCC 134663
| ||||||||||| || ||||||||| |||| || | |||| |||||| | ||
Sbjct 3091 GGATGCCTTCTTTATCCTGAATTTTTGCCTTGA-CGTTTTCAATCGTGTCGCTAGGCTCG 3149
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| |||||||| |||||||| ||||| ||||| || |||||
Sbjct 3150 ACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||||||||| | || ||||| || || || || || ||||| || || || |
Sbjct 1614 AGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAAGAGTTCTA 1673
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || ||||| ||||| ||||||||||| || || ||||||
Sbjct 1674 CCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCCTTCT 1733
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| || | |||||| | ||| || |||||||||
Sbjct 1734 TTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACTTCGAGAGTA 1793
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||||||||| || || |||||||| ||||||||
Sbjct 1794 ATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 129 bits (142), Expect = 6e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| ||| || | || | |||| || ||||| ||||| |||||||| |||
Sbjct 2515 TTCCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGG 2574
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| || | ||| ||||| ||||| || || ||||| ||||| || ||||| || |
Sbjct 2575 AAAGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGG 2634
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || || || || || |||||||| ||||| || | ||||| | || |
Sbjct 2635 GAATTCCCTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTA 2694
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| |||||||| ||||||||||| ||||| ||||| |||||||| |||||
Sbjct 2695 CTTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | ||| | || | |||| || ||||||||||| || ||||| ||| |
Sbjct 3201 CCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAA 3260
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| ||||| || || || || || |||| ||| || ||||| || ||
Sbjct 3261 AGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGA 3320
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||||||||| ||||| || | || || || ||| ||
Sbjct 3321 ATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACT 3380
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || ||||||||||| || || ||||| ||||| || ||||||||
Sbjct 3381 TCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCATTTT 3430
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | ||| | || | || || || ||||| |||||||| || || || |
Sbjct 1833 CCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAG 1892
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || ||| ||||| ||||| || || ||||| | ||| ||||| || || ||
Sbjct 1893 AGAGTTCTGCC-GTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGG 1951
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| ||||| ||||| || | |||||| | || ||
Sbjct 1952 AATTCCCTCCTTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGAC 2011
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || |||||||| ||||| ||||| ||||||||||||||
Sbjct 2012 TTCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576
|| ||||| ||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct 2319 GTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCA 2378
Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636
||||| || | ||| |||||||| || || || || || || ||||||||||| |||
Sbjct 2379 GCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTG 2438
Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696
|| || | ||||| | || || ||||| || || |||||||| ||||| ||
Sbjct 2439 ACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTC 2498
Query 134697 TTAACGAAAATTTGCATT 134714
|| |||||||||||||||
Sbjct 2499 TTGACGAAAATTTGCATT 2516
>seq63578
Length=26733
Score = 140 bits (154), Expect = 3e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| ||||| ||||| |||||||| |||||||||| | ||| | || || | |||
Sbjct 12530 TGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCCATCTTCCAATTGT 12589
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||| || || ||||| || || || || |||||||| |||||||| ||
Sbjct 12590 TTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTTATCTTGAATCTTG 12649
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | || ||||| | ||| || || | |||||||||||| |||||
Sbjct 12650 GCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTA 12709
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
| |||||| ||||| |||||||| |||
Sbjct 12710 AGAGTTTTTACGAAGATTTGCATCTTG 12736
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| || | || || ||||| ||||| ||||| || || |||| | ||| |
Sbjct 11375 AGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGG 11434
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | || || || || |||||||| | |||||| || ||||| || ||||||
Sbjct 11435 CCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCT 11494
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||||||||| ||| || || | || ||||||| ||| || || | |||
Sbjct 11495 TTATCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTA 11554
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || || |||||||||||||| |||||||||||||||
Sbjct 11555 ATAGTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCATT 11593
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || |||||||| || |||||||| || || | | || | || || | |||
Sbjct 11617 GTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCCAACTG 11676
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || ||||| ||||| || ||||| || || |||||||||||||| || ||||||||
Sbjct 11677 TTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCTTTATCCTGAATTTT 11736
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|||||| || | || ||||||| |||||| || | || |||||||| || ||
Sbjct 11737 AGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTTATGGTTTTTCCAGT 11796
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| ||||||||||||||||||||
Sbjct 11797 GAGCGTTTTAACGAAAATTTGCAT 11820
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
||||| |||||||||||||| || ||||| |||| | ||| | ||| || | |||
Sbjct 11846 TGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTTAACGTGCGGCCGTCTTCCAATTGT 11905
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || ||||| || |||||||| ||||| || || |||||||| |||||||| ||
Sbjct 11906 TTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGAATACCTTCTTTGTCTTGAATCTTG 11965
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | ||| ||||| | || || || | || || |||||||||||
Sbjct 11966 GCTTTAACATTCTCGATTGTATCGGATGGCTCTACTTCCAACGTGATAGTTTTACCGGTG 12025
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| ||||| ||||||||||||||
Sbjct 12026 AGCGTTTTTACGAAAATTTGCAT 12048
Score = 125 bits (138), Expect = 7e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| || | || ||||| || || || |||||||||||||||| | || ||
Sbjct 12059 AGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGA 12118
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||||| || || ||||| || | ||||| ||||| || || ||||||
Sbjct 12119 CCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCT 12178
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| |||||| ||| || || | |||||| || | ||| || || | ||
Sbjct 12179 TTATCTTGGATTTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTG 12238
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| ||||| || || | |||||||||||||||||||||
Sbjct 12239 ATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCATT 12277
Score = 122 bits (134), Expect = 9e-23
Identities = 169/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| |||| || || || || | || || |||||||| ||||| || || || ||||
Sbjct 12276 TTCCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGC 12335
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| ||| || ||| || | ||||| || || ||||| || | |||||| ||||| |
Sbjct 12336 TCAAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTG 12395
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCC 134663
| ||||||||||| ||||||||||| ||| | || | |||| || || |||| ||||
Sbjct 12396 GGATGCCTTCTTTGTCTTGAATTTTGGCTTTCA-CGTTTTCAATAGTATCAGACGGTTCC 12454
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGT--TTTAACGAAAATTTGCAT 134713
|| || | || || ||||| ||||||| || ||| | |||||||||||
Sbjct 12455 ACTTCCAAGGTGATAGTTTTTCCGGTTAGCGTAATTTGA--AAAATTTGCAT 12504
>seq52934
Length=6696
Score = 102 bits (112), Expect = 8e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627
|| || || || || |||||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 4010 TGCTTTCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATT 4069
Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687
|| ||| || || | || || || | ||| || |||||||| || ||||||||
Sbjct 4070 TTAGCTTTTACATTTTCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCC 4129
Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713
|||| ||||| ||||| || |||||
Sbjct 4130 GTTAGGGTTTTCACGAAGATCTGCAT 4155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504890563052720
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