Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_027339.1
Length=38389
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 304 3e-78
seq19165 244 3e-60
>seq9614
Length=652
Score = 304 bits (336), Expect = 3e-78
Identities = 179/186 (96%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 34954 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 35013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 35014 ATAACCGCCATCGCTGGACTGTCGAAGAGTGCAGGGCCATCAAGGCGGAGTATCAGCAGA 35073
|||||||||||||||||||| |||||||||||| ||| |||||||| ||||| || ||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 35074 AACTCAAAGACCTGCGAAACAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 35133
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473
Query 35134 TCCAGA 35139
||||||
Sbjct 472 TCCAGA 467
>seq19165
Length=1007
Score = 244 bits (270), Expect = 3e-60
Identities = 158/173 (91%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 23002 TAAGTTCGATCTCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAACAGCCAGGCGTC 23061
||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 181 TAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTC 122
Query 23062 TTCGCTCATCTATCGGATCGCCACACTCACAACAATGAGTTGCGGATACAGTCTGGTAGT 23121
|||| ||||||||||||||||||||||||||||||||||| || |||| || ||||| ||
Sbjct 121 TTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGT 62
Query 23122 TCAGACGACGCATTTTTATTGCTGTATTGCGCTGTAATTCTTCGATTTCTGAT 23174
|||| || ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 61 TCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGAT 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122606050427532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |