Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq9614 1151 0.0 >seq9614 Length=652 Score = 1151 bits (1276), Expect = 0.0 Identities = 644/648 (99%), Gaps = 0/648 (0%) Strand=Plus/Minus Query 33908 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 33967 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593 Query 33968 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 34027 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533 Query 34028 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 34087 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473 Query 34088 TCCAGACATGCTCGTTGAAGCATACGGAAACCAGACAGAAGTAGCACGCAGACTGAAATG 34147 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413 Query 34148 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 34207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353 Query 34208 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 34267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 293 Query 34268 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 34327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 233 Query 34328 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 34387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 173 Query 34388 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTCGAATGCCTGGAATTAATCACATTCC 34447 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 172 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 113 Query 34448 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 34507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 53 Query 34508 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGATGGTTCTTTA 34555 ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 52 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123734572129728