Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 134 1e-26
seq28572 123 2e-23
>seq63578
Length=26733
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || | |||||||| | ||| || ||||||||||||||||||||||||
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | ||||| | ||||||||||| |||| | || || || || || ||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || |||||||| |||||| ||| | | |||| | || || | | |||||||
Sbjct 12626 ATTCCTTCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACT 12685
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| || | ||| || || |||||||| || |||||||||||
Sbjct 12686 TCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || ||||| | |||||| ||||| ||||| ||||||||||||| | || |
Sbjct 12062 CGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCA 12121
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | |||||||||||| |||| | | || || || || || | ||| ||||||
Sbjct 12122 TCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTA 12181
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| || ||| | |||| | ||||| | | ||| ||||||| || |||
Sbjct 12182 TCTTGGATTTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTGATA 12241
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || || || ||||| || || ||||||||
Sbjct 12242 GTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || || |||||||||| || || || ||||| |||||||| |||||
Sbjct 11822 CCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTT 11881
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| ||||||| | |||||||||||| |||| | ||||| || || || ||
Sbjct 11882 AACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGA 11941
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| ||| ||||| || |||||| ||| | | || | || || | |||| || ||
Sbjct 11942 ATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGC-TCTAC 12000
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| | || |||| ||| || || || ||||| || || |||||||||
Sbjct 12001 TTCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCATA 12049
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|| || || ||||| | || || |||||||| ||||| || ||||||| | | || ||
Sbjct 12290 CGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAGGTACGACCG 12349
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | |||||||||||| |||| | | ||| || || || || | || |||||
Sbjct 12350 TCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTG 12409
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| || ||| ||||| | |||| | ||| || | | ||| ||||| | || |||
Sbjct 12410 TCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATA 12469
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| ||| || || || || | ||| |||||||||
Sbjct 12470 GTTTTTCCGGTTAGCGTAATTTGAAAAATTTGCATA 12505
>seq28572
Length=14732
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| | ||| || | || | |||||| || || || |||||||||||||| |||
Sbjct 2061 CCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAG 2120
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || | |||||||| ||||| ||||| |||| | ||| |||||||| || ||
Sbjct 2121 AGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGA 2180
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || ||||| ||| || || | | |||| | ||||| ||| || |||
Sbjct 2181 ATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACT 2240
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | ||| ||||| || ||||| || ||||||||||||
Sbjct 2241 TCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCATA 2288
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTC 27097
||||||||||| ||||| |||||||| || || ||||| | |||| | | |||||
Sbjct 2991 ACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTAC-CATCTTC 3049
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||| |||||||||||| |||| ||||| || || ||||| || | || ||||||||
Sbjct 3050 GAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTG 3109
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|| || || | | |||| | ||||| | | || ||||| ||||| || | |||
Sbjct 3110 AATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTT 3169
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| || | ||||| || ||||| ||||||
Sbjct 3170 GCCGGTTAAGGTTTTTACGAAGATCTGCATA 3200
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | || | ||||||||||| || || |||||||| || ||||| |||
Sbjct 2517 CCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAA 2576
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || |||||||||| |||||||||||| |||| | ||| |||||||| || ||
Sbjct 2577 AGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGA 2636
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| || || || | |||| | ||||| ||| || |||
Sbjct 2637 ATTCCCTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTACT 2696
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | ||| || || | ||||| || || || ||||||
Sbjct 2697 TCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCATA 2744
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076
|||||| || || | ||||| |||||||| | ||| || ||||| || |||||||| ||
Sbjct 1601 ATTGCCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATC 1660
Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136
| | | | ||||| ||||| || |||||| |||| | ||| || ||||| ||
Sbjct 1661 CGAAAGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGG 1720
Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196
|| | || ||||| || |||||| || | | |||| | ||||| | | |||
Sbjct 1721 AGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTC 1780
Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| ||||| || | ||| || |||| || || || ||||||||||||
Sbjct 1781 GACTTCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCATA 1832
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| || | ||||||||||| || || || ||||| |||||||| |||
Sbjct 3201 CCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAA 3260
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || |||||||||| || || || ||| | || ||||| |||||||| || ||
Sbjct 3261 AGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGA 3320
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || ||||| || || || | | |||| | || || | | |||||||
Sbjct 3321 ATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACT 3380
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||| || |||| ||||| || ||||| |||||
Sbjct 3381 TCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCAT 3427
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| || | || ||||| | || || |||||||| || || |||||
Sbjct 2745 CCACCTCTCAATCGAAGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAG 2804
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | |||||||| ||||| || ||| | |||||||| |||||||| || ||
Sbjct 2805 AGAGTTCTTCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGA 2864
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||||||||| || ||| || | | |||| | |||||| | | ||||||
Sbjct 2865 ATTCCCTCTTTATCTTGTATTTTGGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACT 2924
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||| || |||| || || || |||||||||||
Sbjct 2925 TCGAGTGTAATCGTTTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 2971
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT-CGCT 27079
|| || | ||| || | || ||||| | || || |||||||||||||| || | ||
Sbjct 1833 CCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAG 1892
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| || |||||||||| ||||| |||||| |||||||||| || || || || ||
Sbjct 1893 AGAGTTCTGC-CGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGG 1951
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| ||||| ||| ||| || | |||| | ||||| | | || ||
Sbjct 1952 AATTCCCTCCTTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGAC 2011
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
||| || || || | ||| || || | ||||| || || ||||||||| || ||
Sbjct 2012 TTCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCATACCTCCT 2066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424518089909232
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