Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 91.5 1e-13
>seq54470
Length=54847
Score = 91.5 bits (100), Expect = 1e-13
Identities = 230/338 (68%), Gaps = 15/338 (4%)
Strand=Plus/Plus
Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846
||||| |||||||| |||||||| |||||| || || ||||| || || |||| |||
Sbjct 48382 TGTGCGATCATGTAAGTGAGTAGGGAGTAACTGGCGATATTAAAAGGTACTCCTAAACCC 48441
Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACA-CATAAAATTG 111905
||||| | || | |||||| | ||||| |||| || | | ||| | ||||| ||
Sbjct 48442 ATATCGGCAGAACGTTGATACATTTGACACGATAATTCGCCAT-TAACAGCGTAAAACTG 48500
Query 111906 -ACAAAGTACA-TGACAAGGAGGCAATGCCATCCC-----ATTCATAAAGGGTCCCCATG 111958
|| || ||| ||||||||||| | |||||| | || ||| || | || | |
Sbjct 48501 CACTAA--ACAGTGACAAGGAGGTAGGGCCATCTTGGGTAAATC-TAACGGATTCCAA-G 48556
Query 111959 CACACATGATCATCCTTCTGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGA 112018
| || | || || ||||| || | | |||| || |||| | |||||||| |
Sbjct 48557 CGCATAAAATTATTCTTCTATCGTCGGGGTTATTTTTAATGGTATCAATGACATTTTGCA 48616
Query 112019 GCTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATC-CAGTGTATGTTGCCCCATAG 112077
| || || || ||||| | ||||| || || ||| | |||| || || ||
Sbjct 48617 GTTGATCGATGCCTTTGTTGGAGTAATCGGCGTG-CATATCTTTGTACTCAGCTCCGAAG 48675
Query 112078 TGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115
||||||||||||||||| |||| || || ||||| ||
Sbjct 48676 TGTCTCCATTGGAATCCGTAAACTGGACCGAGATCGCC 48713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391561609180918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |