Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_028656.1
Length=65955
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 421 3e-113
seq19165 295 3e-75
>seq9614
Length=652
Score = 421 bits (466), Expect = 3e-113
Identities = 298/340 (88%), Gaps = 1/340 (0%)
Strand=Plus/Minus
Query 25960 ATCGCGTCGAACTGATTAACCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCGAACC 26019
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 26020 ATAACCGCCATCGCTGGACTGTCGAAGAATGCAGGGCGATCAAGGCGAAGTATCAGCAGA 26079
|||||||||||||||||||| ||||||| |||| |||||||||||| |||| || ||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 26080 AACTTAAAGACCTGCGAAACAGCAGAAGTGAGGCCGCATGACGTTCACAGTAAAAACCAT 26139
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473
Query 26140 TCCTGACATGCTCGTTGAGGCATATGAAAATCAGACCGAGGTAGCCAGAATACTGAACTG 26199
||| |||||||||||||| |||| | ||||||||| || ||||| | | |||||| ||
Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413
Query 26200 TAGTCGCAACACGGTCAGAAAATACACTGGCGATAAAGAAGGAAAAAGACACGCTATTGT 26259
||||||| ||||||||||||||| || |||||||| || |||| ||||| || ||
Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353
Query 26260 CAACGGTGTTCTTATGGTTCATCGCGGATGGGGT-AAAGA 26298
||||| ||||| |||||||||||||||||| || |||||
Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGA 313
>seq19165
Length=1007
Score = 295 bits (326), Expect = 3e-75
Identities = 184/198 (93%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 9884 TTTCCAGTTCTGCTATGTGCTTACTTCCATCCGAGATAACGCCCTCGTAATACTCACGCT 9943
||||||||| || || ||||||| |||||||||||||| || ||||||||||||||||
Sbjct 507 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 448
Query 9944 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACGCGCAGCTTCCCTACCGTTAGCG 10003
|||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||
Sbjct 447 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 388
Query 10004 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 10063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 328
Query 10064 CCAGCAGTGCCAGCGCAA 10081
|||||||| ||||| |||
Sbjct 327 CCAGCAGTTCCAGCACAA 310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 210724549780536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |