Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq9614 407 6e-109 >seq9614 Length=652 Score = 407 bits (450), Expect = 6e-109 Identities = 297/343 (87%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 11170 TCTTTACCCCCATTCCCGCGGGTGAACMATAAGAACACCGTTGACGATAGCGTGTCTTTT 11229 ||||| | |||| ||||| ||||| || ||||| |||||||||| ||||| |||| Sbjct 313 TCTTTCACTCCAT--CCGCGA-TGAACCATGAGAACGTCGTTGACGATGGCGTGCATTTT 369 Query 11230 CCCTTCTTTATCGCCAATGTATTTTCTGACTGTGGCACGATTGCAGTTCAGTATTCGGGC 11289 ||| |||||||| ||| |||||||||||| || | ||| | || |||||| | || || Sbjct 370 CCCGTCTTTATCATCAACGTATTTTCTGACCGTACCGCGACTACATTTCAGTCTGCGTGC 429 Query 11290 CACTTCGGTCTGATTTCCATATGCCTCAACAAGCATGTCAGGAATGGTTTTTACGGTGAA 11349 ||||| ||||||||||| |||| ||||| |||||||| |||||||||||||| | ||| Sbjct 430 TACTTCTGTCTGATTTCCGTATGTTTCAACGAGCATGTCTGGAATGGTTTTTACTGAGAA 489 Query 11350 CGTCATGCGGCCTCACTTCTGCTGTTTCGCAGGTCTTTAAGTTTCTGTTGATACTCTGCC 11409 ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct 490 CGTCATGCGGCCTCACTTCTGCTATTTCGCAGGTCTTTGAGTTTCTGTTGGTACTCTGCC 549 Query 11410 TTGATCGCCTTGCACTCTTCGACAGTCCAGCGGTGGCGACTATGGTTTGATTCGATTTCG 11469 |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| Sbjct 550 TTGATCGCCTTGCACTCTTCGATAGTCCAGCGATGGCGGTTATGGTTTGATTCGATTTCG 609 Query 11470 TCTACTGCTTCCTGCCCGATGCGGTTAATCAGTTCGACACGAT 11512 |||||||||||||||||||||||| ||||||||||||| |||| Sbjct 610 TCTACTGCTTCCTGCCCGATGCGGCTAATCAGTTCGACGCGAT 652 Lambda K H 0.635 0.409 0.915 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195004074416004