Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_028685.1
Length=62851
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 425 2e-114
seq19165 168 3e-37
>seq9614
Length=652
Score = 425 bits (470), Expect = 2e-114
Identities = 299/340 (88%), Gaps = 1/340 (0%)
Strand=Plus/Minus
Query 24241 ATCGTGTCGAACTGATTAACCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 24300
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 24301 ATAGTCGCCACCGCTGGACTGTCGAAGAGTGCAAGGCGATCAAGGCAGAGTATCAACAGA 24360
||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 24361 AACTTAAAGACCTGCGAAACAGCAGAAGTGAGGCCGCATGACGTTCACCGTAAAAACCAT 24420
|||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473
Query 24421 TCCTGACATGCTTGTTGAGGCATATGGAAATCAGACCGAAGTGGCCCGAATACTGAACTG 24480
||| |||||||| ||||| |||| ||||||||||| ||||| || || | |||||| ||
Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413
Query 24481 CAATCGTGCCACAGTCAGAAAATACATTGGCGATAAAGAAGGGAAAAGACACGCTATCGT 24540
| ||| | || |||||||||||| ||| |||||||| ||||||| ||||| |||||
Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353
Query 24541 CAACGGTGTTCTTATGGTTCACCGCGGATGGGGT-AAAGA 24579
||||| ||||| |||||||| ||||||||| || |||||
Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGA 313
>seq19165
Length=1007
Score = 168 bits (186), Expect = 3e-37
Identities = 176/226 (78%), Gaps = 14/226 (6%)
Strand=Plus/Minus
Query 7560 TCAAGCTCAACACGCAGCTTTCCTACCGTTAGCGCAATCTCCTCGTTCTCCTGGTCGCGC 7619
||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct 421 TCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGG 362
Query 7620 TGTTTAATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCACAACCTGAGGT 7679
|||| ||||||||||||||||||||| |||||||||||||| ||||||||| | |||
Sbjct 361 CGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGT 302
Query 7680 GTGGC--TTTCATACGAAATGCCAG---CAATTTTTGAGGCGT--TGCTACTGTTTCAAT 7732
|| | ||||| ||| | | | ||| | || ||| ||| | ||
Sbjct 301 GTTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGC-ATTG-----CC 248
Query 7733 TGCTACTGCCGCCTCACGCAGTGCCTGGTAATTAATTTTGCTCACT 7778
|||| ||||||| |||||||||||||| | ||||||| |||||||
Sbjct 247 TGCT-CTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACT 203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200801480988152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |