Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_029120.1
Length=60875
Score E
Sequences producing significant alignments: (Bits) Value
seq19165 282 2e-71
seq9614 136 2e-27
>seq19165
Length=1007
Score = 282 bits (312), Expect = 2e-71
Identities = 180/196 (92%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 58287 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 58346
||||||||| || || |||||||| ||||||| ||| || || |||||||| |||||||
Sbjct 507 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 448
Query 58347 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACGCGCAGCTTCCCTACCGTAAGCG 58406
|||||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||
Sbjct 447 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 388
Query 58407 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 58466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 328
Query 58467 CCAGCAGTGCCAGCAC 58482
|||||||| |||||||
Sbjct 327 CCAGCAGTTCCAGCAC 312
Score = 145 bits (160), Expect = 3e-30
Identities = 113/135 (84%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 58991 GCTCACTTCACACCTCTCTGTTTGTTGATAAGTTCAATATCCTGCTGGCAACTGGCGCAA 59050
||||||||| |||||||||||| |||||||||| | ||||| ||||||||| || |||
Sbjct 209 GCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAA 150
Query 59051 GTTCGGCATCCGCGAACAGCCTGGCGTCGCCGCTCATCTATCGGATCGCCACACTCGCAA 59110
|| || || || |||| || |||||| || ||||||||||||||||||||||| |||
Sbjct 149 GTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAA 90
Query 59111 CAATGAGTAGCAGAT 59125
|||||||| ||||||
Sbjct 89 CAATGAGTGGCAGAT 75
>seq9614
Length=652
Score = 136 bits (150), Expect = 2e-27
Identities = 112/135 (83%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 19095 GGAAATCAGACAGAAGTCGCCAGAATACTGAACTGCAATCGTGCCACAGTCAGAAAATAC 19154
||||||||||||||||| || | | |||||| || | ||| | || ||||||||||||
Sbjct 447 GGAAATCAGACAGAAGTAGCACGCAGACTGAAATGTAGTCGCGGTACGGTCAGAAAATAC 388
Query 19155 ATTGATGATAAAGATGCGAAAAAGCACGCCGTCGTCAATGGCGTCCTTATGGTTCATCGC 19214
||||||||||||| | ||||| ||||||| ||||||| | ||| || ||||||||||||
Sbjct 387 GTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTTCTCATGGTTCATCGC 328
Query 19215 GGATGGGGT-AAAGA 19228
|||||| || |||||
Sbjct 327 GGATGGAGTGAAAGA 313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194492563162884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |