Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 150 4e-31
seq52934 127 5e-24
seq63578 125 2e-23
seq46443 98.7 2e-15
seq77090 87.8 4e-12
>seq28572
Length=14732
Score = 150 bits (166), Expect = 4e-31
Identities = 169/225 (75%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| | || | || || || |||||||| ||||| || ||||||| ||| ||
Sbjct 1610 ACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAAGAGT 1669
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| |||||||| |||||||| || ||||| || | ||||| || || ||||| | |||
Sbjct 1670 TCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCC 1729
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069
||| ||||| |||||||| || ||||||||||||||||| ||| ||| || ||
Sbjct 1730 TTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTC---GCTAGGTTCGACTTC 1786
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || || || | ||||| || || | |||||
Sbjct 1787 GAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 138 bits (152), Expect = 3e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || || |||||||| || ||||| | ||| || | || ||||| || ||||| ||
Sbjct 3230 AGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCGAGTTGCTTTCC 3289
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|||||||| || |||||||| |||||||||| |||||||| || || || || ||
Sbjct 3290 AGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTCGCCTT 3349
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
||||||||||| || ||| |||||| ||||| ||||| || || || || | ||
Sbjct 3350 GACGTTTTCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTTACCAGTCAACGT 3409
Query 211097 CTTTACAAACACCTGCATTTT 211117
||||| || | |||||||||
Sbjct 3410 TTTTACGAAGATCTGCATTTT 3430
Score = 136 bits (150), Expect = 9e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || ||||||||||||||||| |||| ||| || ||||||||||| || || || ||
Sbjct 2319 GTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCA 2378
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| |||||||| ||||| || ||||| |||| ||| ||||| || || || || ||
Sbjct 2379 GCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTG 2438
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||| |||||| || |||||||| ||||| || || || || | |||
Sbjct 2439 ACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTC 2498
Query 211098 TTTACAAACACCTGCATT 211115
|| || || | ||||||
Sbjct 2499 TTGACGAAAATTTGCATT 2516
Score = 134 bits (148), Expect = 3e-26
Identities = 160/216 (74%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||||| || || ||||||||||||||||| || | || || |||||||||
Sbjct 2760 AGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCT 2819
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || ||||| |||||||| || |||||||| || || |||| ||| || || ||
Sbjct 2820 TCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCT 2879
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|| || || || |||||||| || ||||| ||| ||||| ||||| || |||
Sbjct 2880 TGTATTTTGGCCTTGACGTTTTCAATAGTGTC---GCTAGGCTCAACTTCGAGTGTAATC 2936
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || | ||||| || || | ||||||
Sbjct 2937 GTTTTACCAGTCAAGGTCTTGACGAAGATTTGCATT 2972
Score = 134 bits (148), Expect = 3e-26
Identities = 151/201 (75%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || ||||||||||||||||| |||| ||| || || |||||||| || || || ||
Sbjct 3002 AGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCGAGTTGTTTACC 3061
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
||||| || || ||||| ||||| ||||| | ||||| || ||||| || ||| ||
Sbjct 3062 GGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTGAATTTTTGCCTT 3121
Query 211037 CACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093
|||||||| || ||||| ||| || || ||||||||||| || || || || |
Sbjct 3122 GACGTTTTCAATCGTGTC---GCTAGGCTCGACTTCGAGAGTGATGGTTTTGCCGGTTAA 3178
Query 211094 AGTCTTTACAAACACCTGCAT 211114
|| ||||| || | ||||||
Sbjct 3179 GGTTTTTACGAAGATCTGCAT 3199
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || | ||| || || ||||| || || ||||| | ||||| | ||||||
Sbjct 2076 AGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCT 2135
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || ||||| || || || | |||||||| || || |||| ||||||||| ||
Sbjct 2136 TCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCT 2195
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || |||||||||||||||||| | || || ||||||||||| ||
Sbjct 2196 TGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTT 2255
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || || || || | |||||
Sbjct 2256 TTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || |||||||||||||| ||||| | ||| || | || ||||| || || || ||
Sbjct 2547 GTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCGAGTTGTTTACCG 2606
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
||||| || | |||||||| ||||| |||| ||| ||||| ||||| || || ||
Sbjct 2607 GCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTGAATTTTAGCCTTG 2666
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| ||||||||||||||| | || || ||||||||||| || || || || | ||
Sbjct 2667 ACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTTACCAGTTAAGGTT 2726
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | ||||||
Sbjct 2727 TTGACGAAAATCTGCAT 2743
>seq52934
Length=6696
Score = 127 bits (140), Expect = 5e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984
|||||||||| || ||||| | || || || |||||||||| ||||| || |||||||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044
| | ||||| ||||| ||||| | ||||| || || || || || ||| || ||||
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
| || || || || ||| || |||||||||||||| || ||||| || || || || |
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 211105 ACACCTGCAT 211114
| | ||||||
Sbjct 4146 AGATCTGCAT 4155
>seq63578
Length=26733
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| | ||| || || | |||||||||||| ||||| || ||||||||||| || ||
Sbjct 11599 ACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGT 11658
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| ||| || || || ||||| | ||||| ||||| || || | ||
Sbjct 11659 ACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCC 11718
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| || ||||| || || ||| || ||||| ||||| || || ||| ||||| |
Sbjct 11719 TTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAA 11778
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| ||||| || || || || | |||||
Sbjct 11779 GGTTATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 123 bits (136), Expect = 6e-23
Identities = 164/225 (73%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGT 210952
||||| | |||||| | ||||| || || |||||||| || || || || | ||| | |
Sbjct 12512 CGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATG-T 12570
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| || || || || || || | ||||| |||||||| || | |||
Sbjct 12571 GCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCC 12630
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| || || || ||||| ||| ||||||||||| || || || |||||| || |
Sbjct 12631 TTCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAA 12690
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||| || || ||||| || ||||| ||||| || | ||||| ||
Sbjct 12691 AGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCATCTT 12735
Score = 109 bits (120), Expect = 1e-18
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGT 210952
||||| | || || | ||||||||||| ||||||||||| |||||||| | ||| |||
Sbjct 12284 CGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAA-GGT 12342
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||||| || || || ||||| || | | || ||||| || || | ||
Sbjct 12343 ACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCC 12402
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| ||||| || || || |||||||||||| || || ||||| ||| || || |
Sbjct 12403 TTCTTTGTCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAA 12462
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || ||||| || || || || ||| | |||||
Sbjct 12463 GGTGATAGTTTTTCCGGTTAGCGTAATTTGAAAAATTTGCAT 12504
>seq46443
Length=17015
Score = 98.7 bits (108), Expect = 2e-15
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||| || |||||||||||||||||||| | |||||| | ||||||||| || ||
Sbjct 12719 TGCAGAGTAGATTCTTTTTGGATGTTATAATCGGAAAGGGTACGTCCATCTTCGAGTTGT 12778
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
|| || || || || | |||||||||||||||||||
Sbjct 12779 TTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAA 12815
>seq77090
Length=20911
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || |||||||||||||| ||||| | ||| || | ||||||||| || ||||| ||
Sbjct 10602 GTCGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCGTCCATCTTCAAGTTGCTTACCA 10543
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
||||| || | |||||||| ||||||||||
Sbjct 10542 GCGAAAATCAAACGTTGTTGATCAGGAGGAA 10512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1157958136468890
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