Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 143 6e-29
seq63578 138 3e-27
seq52934 131 4e-25
seq77090 84.2 5e-11
>seq28572
Length=14732
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| || || | || || || || ||||| |||| ||||||||| | | |||
Sbjct 1610 ACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAAGAGT 1669
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| |||||||| |||||||| || ||||| || | ||||| || ||||| || || ||
Sbjct 1670 TCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCC 1729
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| |||||||||||||| ||| || |||||||||||| | ||| || || |
Sbjct 1730 TTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACTTCGAG 1789
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || ||||| || || | ||| | ||||||
Sbjct 1790 AGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| ||||| ||||||| ||||||||||| | |||| || ||||| || ||||| ||
Sbjct 3230 AGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCGAGTTGCTTTCC 3289
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||||||| || |||||||| || || |||||||||||||| ||||| || || |||
Sbjct 3290 AGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTCGCCTT 3349
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
|| |||||| || || | ||| || || | ||||| || || || ||||| ||
Sbjct 3350 GACGTTTTCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTTACCAGTCAACGT 3409
Query 225696 TTTTATGAACACTTGCATTTT 225716
||||| ||| | ||||||||
Sbjct 3410 TTTTACGAAGATCTGCATTTT 3430
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | || ||||| ||||||||||| | ||| ||||| | | |||||| || |||
Sbjct 1848 AGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAGAGAGTTCTGCCGTCT 1907
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || || || ||||| || || ||||| ||||| || ||||| || ||||| |||
Sbjct 1908 TCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGGAATTCCCTCCTTATCT 1967
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| ||| |||||| ||||| | || || || | ||||| ||
Sbjct 1968 TGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGACTTCGAGGGTGATTGTT 2027
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || ||||| | ||| | ||||||
Sbjct 2028 TTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || || || | ||| ||||| ||||| | ||||||||||| | |||| ||||||
Sbjct 2076 AGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCT 2135
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || || || || || || | |||||||| || || ||||| |||||||| |||
Sbjct 2136 TCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCT 2195
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| || |||||||||||| || || || || | ||||| ||
Sbjct 2196 TGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTT 2255
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| | ||||| | ||| | ||||||
Sbjct 2256 TTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | || || || ||||||||||||| || || || | | |||||| ||||||
Sbjct 2760 AGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCT 2819
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || || ||||||||||| || |||||||| ||||| ||||| || || || |||
Sbjct 2820 TCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCT 2879
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||| || ||| || ||||| | || || || | || |||||
Sbjct 2880 TGTATTTTGGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACTTCGAGTGTAATCGTT 2939
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || ||||| || || | ||| | |||||||
Sbjct 2940 TTACCAGTCAAGGTCTTGACGAAGATTTGCATT 2972
Score = 114 bits (126), Expect = 3e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||||||||||| || || || | | |||||| |||||||| || || || |||
Sbjct 2319 GTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCA 2378
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| |||||||| ||||| || || || ||||| || ||||| ||||| || || |||
Sbjct 2379 GCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTG 2438
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| |||||| ||||| | || || || | ||||| || || || || || ||
Sbjct 2439 ACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTC 2498
Query 225697 TTTATGAACACTTGCATT 225714
|| | ||| | |||||||
Sbjct 2499 TTGACGAAAATTTGCATT 2516
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||||||||||| |||||||||| | ||||| || ||||| || || || ||
Sbjct 2547 GTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCGAGTTGTTTACCG 2606
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
||||| || | |||||||| || || ||||| || ||||| || || || || |||
Sbjct 2607 GCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTGAATTTTAGCCTTG 2666
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| |||||||||||| || || || || | ||||| || || || || || |||
Sbjct 2667 ACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTTACCAGTTAAGGTT 2726
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | |||||
Sbjct 2727 TTGACGAAAATCTGCAT 2743
Score = 100 bits (110), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| ||||||||||||| || || || | | ||||| |||||||| || || || ||
Sbjct 3002 AGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCGAGTTGTTTACC 3061
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| || || ||||| ||||| || || || ||||| || || || || ||| |||
Sbjct 3062 GGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTGAATTTTTGCCTT 3121
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
|| ||| || ||||| | || || || | ||||| || ||||| || || ||
Sbjct 3122 GACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTTGCCGGTTAAGGT 3181
Query 225696 TTTTATGAACACTTGCAT 225713
||||| ||| | |||||
Sbjct 3182 TTTTACGAAGATCTGCAT 3199
>seq63578
Length=26733
Score = 138 bits (152), Expect = 3e-27
Identities = 155/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || || || ||||| || | ||||| ||| |||||| | |||||||||| ||
Sbjct 12074 TGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCTTCTAATTGT 12133
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || ||||| || | || ||| |||||||| || |||||||| || |||||||| |||
Sbjct 12134 TTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTATCTTGGAT-TTT 12192
Query 225631 TGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||||| ||| |||||| ||||| || | ||| || ||||||||||| || || || ||
Sbjct 12193 TGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTGATAGTTTTTCCAGT 12252
Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714
| ||||| | ||| | |||||||
Sbjct 12253 GAGCGTTTTAACGAAAATTTGCATT 12277
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | | ||| | || || |||||||| ||||||| |||||||||| || ||
Sbjct 11828 CGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTTAACGTG 11887
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| | || || || ||||| || | ||| || |||||||| |||||||||
Sbjct 11888 CGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGAATACCT 11947
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| |||||||| ||||| || ||| ||||| || || || | || || || |||
Sbjct 11948 TCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTACTTCCAAC 12007
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || | ||||||| ||| | ||||||
Sbjct 12008 GTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 116 bits (128), Expect = 9e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||| || || | ||| |||||||||||||| || | || ||||| || |||
Sbjct 11599 ACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGT 11658
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||| || || || ||||| | |||||| ||||| || || || ||
Sbjct 11659 ACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCC 11718
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| || || || || ||| || || ||| ||| ||||| || || | |||||| || |
Sbjct 11719 TTCTTTATCCTGAAT-TTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCA 11777
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| || || || || || || | ||||| | ||| | ||||||
Sbjct 11778 AGGTTATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 111 bits (122), Expect = 4e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| ||||||||||||||||||| ||| |||||| ||| || | || ||||| | ||
Sbjct 12302 TGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAGGTACGACCGTCTTCCAATTGT 12361
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || ||||| || | || || |||||||| || || ||||| |||||||| || |||
Sbjct 12362 TTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTGTCTTGAAT-TTT 12420
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| ||| || || || || | |||||| || || ||||| || || || ||
Sbjct 12421 GGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATAGTTTTTCCGGT 12480
Score = 111 bits (122), Expect = 4e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| | || || || ||||||||||| | |||||| ||| ||| ||
Sbjct 12512 CGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTG 12571
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | || || || || || || | ||||| ||||| || || || |||
Sbjct 12572 CGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCT 12631
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| || ||||| ||||| || || |||||| || || || | ||| || || ||
Sbjct 12632 TCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAA 12691
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || || || || | |||||||| ||| | |||||| ||
Sbjct 12692 GTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCATCTT 12735
>seq52934
Length=6696
Score = 131 bits (144), Expect = 4e-25
Identities = 150/198 (76%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 225519 GGATT--CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
||||| ||||||||| ||||||||||| | |||||| |||||||| | ||||| ||
Sbjct 3959 GGATTACCTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCG 4018
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635
|||||||| | ||||| |||||||| || |||||||| || ||||| || ||| || ||
Sbjct 4019 GCGAAGATCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAAT-TTTAGCTTT 4077
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||| || || || || | ||| || || | |||||||| || ||||| | ||
Sbjct 4078 TACATTTTCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGT 4137
Query 225696 TTTTATGAACACTTGCAT 225713
||| | ||| | |||||
Sbjct 4138 TTTCACGAAGATCTGCAT 4155
>seq77090
Length=20911
Score = 84.2 bits (92), Expect = 5e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||||||||||| |||||||| | | ||||| |||||||| || ||||| |||
Sbjct 10602 GTCGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCGTCCATCTTCAAGTTGCTTACCA 10543
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
||||| || | |||||||| || || ||||| |||
Sbjct 10542 GCGAAAATCAAACGTTGTTGATCAGGAGGAATGCCT 10507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191302957707884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |