Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 123 2e-23
>seq54470
Length=54847
Score = 123 bits (136), Expect = 2e-23
Identities = 230/338 (68%), Gaps = 0/338 (0%)
Strand=Plus/Plus
Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273
|| || || || |||||||| ||||| || ||||| |||||||| ||||| ||||| ||
Sbjct 48376 GTAACATGTGCGATCATGTAAGTGAGTAGGGAGTAACTGGCGATATTAAAAGGTACTCCT 48435
Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAA 27333
| ||||| || | || | || || | |||||||| | || |||| |||||
Sbjct 48436 AAACCCATATCGGCAGAACGTTGATACATTTGACACGATAATTCGCCATTAACAGCGTAA 48495
Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 27393
||||| || ||| || ||||| || ||||| | || ||| || |||||
Sbjct 48496 AACTGCACTAAACAGTGACAAGGAGGTAGGGCCATCTTGGGTAAATCTAACGGATTCCAA 48555
Query 27394 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 27453
||||| | || || | || || || ||||| || | ||| || | | | ||||||
Sbjct 48556 GCGCATAAAATTATTCTTCTATCGTCGGGGTTATTTTTAATGGTATCAATGACATTTTGC 48615
Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAA 27513
|| ||||| | || | ||||| || | ||| || ||||||| ||||||||
Sbjct 48616 AGTTGATCGATGCCTTTGTTGGAGTAATCGGCGTGCATATCTTTGTACTCAGCTCCGAAG 48675
Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|| ||||||||||| ||||| || || || || || ||
Sbjct 48676 TGTCTCCATTGGAATCCGTAAACTGGACCGAGATCGCC 48713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369145192179566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |