Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq19165 780 0.0
seq9614 122 6e-23
>seq19165
Length=1007
Score = 780 bits (864), Expect = 0.0
Identities = 434/435 (99%), Gaps = 0/435 (0%)
Strand=Plus/Minus
Query 82690 ATATCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 82749
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 ATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 696
Query 82750 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 82809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 636
Query 82810 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 82869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 635 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 576
Query 82870 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 82929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 516
Query 82930 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 82989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 456
Query 82990 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 83049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 396
Query 83050 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 83109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 395 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 336
Query 83110 CCGTTCATCCAGCAG 83124
|||||||||||||||
Sbjct 335 CCGTTCATCCAGCAG 321
>seq9614
Length=652
Score = 122 bits (134), Expect = 6e-23
Identities = 206/292 (71%), Gaps = 10/292 (3%)
Strand=Plus/Plus
Query 88241 AAGAACCATTGTCCGCCATTCATTAGCCAGTTATTCACGTTGCCA---TCTGGACTTAAC 88297
|||||||| |||||||| | ||||||| ||| ||||| ||| |||| |||
Sbjct 7 AAGAACCAGCCACCGCCATTAAGCAGCCAGTGATTAACGTTTCCACGCTCTGA---TAAG 63
Query 88298 GCATCAATCATCAGCCGCTCATGGTTCCCCATCACTGCCCTGAACCA-GGGCATCTGCAA 88356
|||||||||||| |||||||||| || || || |||||||| ||| || || |
Sbjct 64 CCATCAATCATCATTTGCTCATGGTTTCCACGTACAGCTCTGAACCAGGGGAATGTG-AT 122
Query 88357 TAGTTCCAGACATTCGACATTTTCAGTACCGCGATCGATAAGGTCGCCGACCGATATCAG 88416
|| |||||| ||||| || || || | ||| ||||| | | ||||| ||||| || ||
Sbjct 123 TAATTCCAGGCATTCAACGTTCTCTGCACCACGATCAACCAAATCGCCCACCGAGATAAG 182
Query 88417 TAAATCCTGCGCCGGGTCAAAATCCACACG-ATGGAGTTCGGACATCAGTCTGGTGTAGC 88475
| || | ||| |||||| || || |||| | |||||| | |||||||
Sbjct 183 CAGGTCTTTTTTGTTGTC-GAATCCAATCGTATCCAGTTTGTTCATCAGGTTCGTGTAGC 241
Query 88476 AACCATGCAGATCACCAACAACCCAGACATTCCTGTATTTGGTACCGTCGAT 88527
| || |||||||| ||||| ||||| | ||| | ||||||| | || || ||
Sbjct 242 ATCCGTGCAGATCGCCAACTACCCAAATATTTCGGTATTTGCTGCCATCAAT 293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330575016606076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |