Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq52934 134 3e-26
seq28572 132 1e-25
seq63578 118 2e-21
>seq52934
Length=6696
Score = 134 bits (148), Expect = 3e-26
Identities = 146/192 (76%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAA 151972
|||||||||| |||||||||| || |||||| |||||||| | ||||| ||||||||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTT--CCGGCGAA 4023
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| | | |||||||| | | ||| ||||| || ||||||||||| ||| ||| |
Sbjct 4024 GATCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATT 4083
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | | || ||| || ||||| ||||| || ||||| ||||| || || |||||
Sbjct 4084 TTCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCAC 4143
Query 152093 GAAGACCTGCAT 152104
||||| ||||||
Sbjct 4144 GAAGATCTGCAT 4155
>seq28572
Length=14732
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || | ||| | |||||| |||||||||||||| || || | | |||
Sbjct 2979 CTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTT 3038
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| |||||||| || ||| |||||||| || || | |||||||||| | ||| |||
Sbjct 3039 CTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCT 3098
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || ||||||||| ||||| | || | |||| | ||| ||||| |||
Sbjct 3099 TCTTTATCCTGAATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGA 3158
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||| || | || || ||||||| ||||||
Sbjct 3159 GTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 109 bits (120), Expect = 1e-18
Identities = 158/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||| | || || |||||||||||||||||||||| | |||||
Sbjct 2525 GAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCG 2584
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || ||| |||||||| || | | || || || | | ||||| ||
Sbjct 2585 GCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTC 2644
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAG 152062
||| || |||||||| |||||| | || | | |||| ||| ||||||||| ||
Sbjct 2645 CTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTC---ACTGGGCTCTACTTCGAG 2701
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || ||||| || || | || || ||||| | ||||||
Sbjct 2702 AGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | |||||| || || |||||||||||||| || || | | |||||| ||||||
Sbjct 2760 AGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCT 2819
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || |||||||| || | || || || | | ||||| || || |||
Sbjct 2820 TCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCT 2879
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| ||||| ||||| | || | |||| | ||| ||||| || ||||| |||
Sbjct 2880 TGTATTTTGGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACTTCGAGTGTAATCGTT 2939
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || | ||||| ||||||| ||||||
Sbjct 2940 TTACCAGTCAAGGTCTTGACGAAGATTTGCATT 2972
Score = 107 bits (118), Expect = 4e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|| ||| || | ||| | || || |||||||||||||| || || | | |||||| ||
Sbjct 2300 TCGGAGAACTAAATGCAATGTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCC 2359
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| || ||| || || |||||||| | ||||| || | | ||||| |||||
Sbjct 2360 ATCTTCGAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTT 2419
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||||||||| |||||| | || | |||| | ||| || || || || ||
Sbjct 2420 ATCTTGAATTTTGGCCTTGACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGAT 2479
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|||||| || || | ||||| ||||| | ||||||
Sbjct 2480 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2516
Score = 105 bits (116), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| | ||| || || ||||| || |||||||||| | |||| ||||||
Sbjct 2076 AGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCT 2135
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| ||||| || || | | || || || | | ||||||||||| |||
Sbjct 2136 TCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCT 2195
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| ||||| ||||| | || | | |||| ||| ||||||||| ||||| ||
Sbjct 2196 TGGATTTTAGCCTTGACGTTTTCGATGGTGTC---ACTGGGCTCTACTTCGAGAGTGATG 2252
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| || || || ||||||| |||||
Sbjct 2253 GTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 91.5 bits (100), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 10/220 (5%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| | ||| || || |||||||| |||||||||| | |||| || |||
Sbjct 3216 AGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCT 3275
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || |||||||| || | || || || | | || |||||||| |
Sbjct 3276 TCGAGTTGCTTT--CCAGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTAT 3333
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAA 152067
|||||||||| ||||| | || | | || |||| || ||||| || || |
Sbjct 3334 CTTGAATTTTCGCCTTGACGTTTTCGATCGTATC---ACTCGGTTCAACTTCGAGGGTGA 3390
Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| ||||| || || | || || ||||||| |||||||||
Sbjct 3391 TGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCATTTT 3430
>seq63578
Length=26733
Score = 118 bits (130), Expect = 2e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || ||||||||||| || |||||||| ||| ||||| | ||||||||||
Sbjct 12073 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCTTCTAATTG 12132
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| |||||||| || | || |||||||| | | ||| ||||| || ||||| |||||
Sbjct 12133 TTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTATCTTGGATTTT 12192
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| ||| ||| | || | |||| || || ||||| | || |||||||| || ||
Sbjct 12193 TGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTGATAGTTTTTCCAGT 12252
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
||| || || ||||| | ||||||
Sbjct 12253 GAGCGTTTTAACGAAAATTTGCATT 12277
Score = 111 bits (122), Expect = 4e-19
Identities = 150/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958
|||||| || ||||| || || || || |||||| ||| || | |||||||| | |
Sbjct 11389 ATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGGCCATCTTCCAATTG 11448
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|||| || ||||| || | ||||||||||| | || ||| ||||| || |||||||||
Sbjct 11449 CTTT--CCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCTTTATCTTGAATT 11506
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| ||| || |||| | | | || || || ||||| | |||||||| |||||
Sbjct 11507 TTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTAATAGTCTTGCCG 11566
Query 152079 GTGAGAGTCTTCACGAAGACCTGCATT 152105
|| | ||| |||||||| | ||||||
Sbjct 11567 GTTAAAGTTTTCACGAAAATTTGCATT 11593
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||||||||| || ||||||||||| || |||||| || || | || ||||| |
Sbjct 12301 ATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAGGTACGACCGTCTTCCAATTG 12360
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| |||||||| || | ||||||||||| | | ||| ||||| || |||||||||||
Sbjct 12361 TTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTGTCTTGAATTTT 12420
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| || | || | | || || || ||||| | || |||||||| || ||
Sbjct 12421 GGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATAGTTTTTCCGGT 12480
Query 152081 GAGAGT 152086
|| ||
Sbjct 12481 TAGCGT 12486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1152632427315006
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