Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7792 116 4e-21 seq13914 96.9 4e-15 >seq7792 Length=27931 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 |||| ||||| || ||||| ||| || || ||||| ||||||| ||||| |||| Sbjct 19175 CTTCGTCCCTTGATATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTT 19234 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 ||| |||||||||||||||||| ||| |||||||| || || || || || ||||| | Sbjct 19235 TAAGCCAAAATATTGCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACG 19294 Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710 | | | | | ||||| || ||||| | ||||| |||||||| | ||| | | Sbjct 19295 CTATGATCCTTTCTCCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTG 19354 Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757 | ||| || ||||| ||||||||||| || || || || ||| Sbjct 19355 CTTTCTTCTTAACACAAGGCATTGTTTCAATAGCATTGAACAGGAAA 19401 >seq13914 Length=11729 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23545 ATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATT 23604 || |||||||| || || | ||| ||||||| || | |||||||| ||||||||| Sbjct 7900 ATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTTTAAGCCAAAATATC 7959 Query 23605 GCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTA 23664 |||||||| ||| |||||||||||||| || ||||| ||||| || | | | | Sbjct 7960 GCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAGCTATGATTCTTTCT 8019 Query 23665 CCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA 23724 ||||| || || || | ||| ||||| || | ||| | ||| || || ||| Sbjct 8020 CCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAGCTTTTCTCTTAACA 8079 Query 23725 CACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757 ||| || |||||||| || || || || ||| Sbjct 8080 CACGGCATGGTTTCAATGGCATTGAATAGGAAA 8112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520963995820400