Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq7792 116 4e-21
seq13914 96.9 4e-15
>seq7792
Length=27931
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
|||| ||||| || ||||| ||| || || ||||| ||||||| ||||| ||||
Sbjct 19175 CTTCGTCCCTTGATATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTT 19234
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
||| |||||||||||||||||| ||| |||||||| || || || || || ||||| |
Sbjct 19235 TAAGCCAAAATATTGCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACG 19294
Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710
| | | | | ||||| || ||||| | ||||| |||||||| | ||| | |
Sbjct 19295 CTATGATCCTTTCTCCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTG 19354
Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757
| ||| || ||||| ||||||||||| || || || || |||
Sbjct 19355 CTTTCTTCTTAACACAAGGCATTGTTTCAATAGCATTGAACAGGAAA 19401
>seq13914
Length=11729
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 23545 ATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATT 23604
|| |||||||| || || | ||| ||||||| || | |||||||| |||||||||
Sbjct 7900 ATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTTTAAGCCAAAATATC 7959
Query 23605 GCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTA 23664
|||||||| ||| |||||||||||||| || ||||| ||||| || | | | |
Sbjct 7960 GCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAGCTATGATTCTTTCT 8019
Query 23665 CCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA 23724
||||| || || || | ||| ||||| || | ||| | ||| || || |||
Sbjct 8020 CCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAGCTTTTCTCTTAACA 8079
Query 23725 CACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757
||| || |||||||| || || || || |||
Sbjct 8080 CACGGCATGGTTTCAATGGCATTGAATAGGAAA 8112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520963995820400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |