Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_000929.1
Length=36717
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 187 6e-43
>seq9686
Length=37809
Score = 187 bits (206), Expect = 6e-43
Identities = 395/582 (68%), Gaps = 8/582 (1%)
Strand=Plus/Plus
Query 35056 ATGGCATGATT--GGCGCTTTTAAACAG-GAGATCCAGAGTGCTGATTGGCTATGTAAGG 35112
|||||||||| ||| ||||| || | || | ||| |||||||||||||||| |
Sbjct 27123 ATGGCATGATCACGGC-CTTTTGAAGGGTGAAAACCAA--TGCTGATTGGCTATGTTCGC 27179
Query 35113 GTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTTGTTTGTGCAGGATGT 35172
|||||||||||||||||||| || | | ||||| || || || | | ||||| |||
Sbjct 27180 GTATCAACAAATGACCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGT 27239
Query 35173 GAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGACCGACCGGGATTAAAACGC 35232
|| | ||| ||||||||||| | || || | || | | ||||| || || | || ||
Sbjct 27240 GAGCTAATTTTTGAAGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGT 27299
Query 35233 G-CTTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGG 35291
| | | | || || |||| || || ||||| || ||||| |||| || || ||
Sbjct 27300 GTGCTCAGAACG-CTAGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGG 27358
Query 35292 GCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAGAGCGAGGGATTAATTT 35351
|| |||||| |||| | | ||||| | ||| | || || |||||||||| ||
Sbjct 27359 ACGCAGCATGCGACATCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTT 27418
Query 35352 TCGCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGGGGCGTTTTTTCTTCCACGT 35411
||| || || || ||||| |||||||| | || |||||||| || || ||||| ||
Sbjct 27419 TCGGAGCCTGACAGACAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGT 27478
Query 35412 TATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATTATCGAGCGAACGATGGCTGGACT 35471
||||| || ||||| || ||||| ||||| || || |||| ||||| ||||| |
Sbjct 27479 AATGGGCGCACTGGCCGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTT 27538
Query 35472 TGCTGCCGCCAGAAATAAAGGCCGTATTGGTGGGCGACCACCTAAACTAACCAAAGCGGA 35531
|| || || | | || | ||||| || ||| || ||| | | |||| ||
Sbjct 27539 AGCAGCTGCACGCGCAGAGGGTAGGATTGGAGGCAGACGCCCAAAATATAGCGAAGCTGA 27598
Query 35532 ATGGGAGCAGGCCGGGCGTTTATTAGCACAAGGAATCCCCCGCAAGCAGGTTGCATTGAT 35591
|||| ||| || | || ||| | ||||| | |||||||| ||| | ||
Sbjct 27599 GTGGGCTCAGATGGGAAGGTTGATAGAAGGGGGAATGGATAGAAAGCAGGTGGCAATCAT 27658
Query 35592 CTACGATGTGGCCCTGTCAACTCTGTATAAAAAACACCCCGC 35633
||| ||||| | | || |||||||| || ||| |||||
Sbjct 27659 CTATGATGTCGGGGTATCTACTCTGTACAAGAAATTTCCCGC 27700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117288295178542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |