Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq4723 82.4 2e-11 >seq4723 Length=43540 Score = 82.4 bits (90), Expect = 2e-11 Identities = 128/178 (72%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 36230 TGTTTGCGTTT-GCCTTTCTTTTTCTGCCAGTGTTGCCCTTTCACGACCGTTATTCTTT- 36287 |||||||| || || ||| | | ||||||||||||| ||| | | ||| || | Sbjct 42469 TGTTTGCGCTTCGCACCTCTCATCCCGCCAGTGTTGCCCGTTCCCACGCCTTAATCGCTC 42410 Query 36288 --ACGAAACGGGGCTAATCTTCTCGCCAACCGGATCGCGTTTGGCGGTACATCGCATTTT 36345 |||| |||| || |||||| ||||||||||||| ||| | ||| |||| ||| Sbjct 42409 TCACGA---GGGGGTAGCCTTCTCACCAACCGGATCGCCGCTGGTGATACGCCGCA-TTT 42354 Query 36346 ATGCGCAGGGGTCTCAACAGAAAAATC-TGTGCTGTTCCGACTTTCTAAATTGTTAAA 36402 |||| ||||||| ||||| | | | |||||||||||||||| | |||||||| Sbjct 42353 GTGCGTTGGGGTCTAAACAGGATTACCGAGTGCTGTTCCGACTTTGCATGTTGTTAAA 42296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116671139831628