Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 95.1 1e-14
>seq5375
Length=21980
Score = 95.1 bits (104), Expect = 1e-14
Identities = 228/345 (66%), Gaps = 0/345 (0%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| ||| | || ||| | ||||||||||||||| | ||||| || || ||||| ||
Sbjct 1467 GGCGACTTGGGTCCCGTCTACGGCTTCCAGTGGCGTCATTTCGGCGCCGAATACTCCAAC 1408
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908
|| || | ||| || ||||| | ||||| ||| || || | | || ||
Sbjct 1407 ATGCATGCAGATTATAGCCAACAAGGTGTGGATCAACTGGAACACATTCTCCACACCATC 1348
Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968
||||| |||||||| || || ||| || || | ||||| || | | |||
Sbjct 1347 AAAACCAACCCAGATGATCGCCGCATGGTTTTAAGCGCCTGGAACCCTTGCGCCTTACCC 1288
Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028
||||| ||| ||||| || ||| || |||||||| || || ||||| || |
Sbjct 1287 CAAATGGCACTTCCTCCTTGCCACTGCCTAGCGCAGTTTTATGTGGCCAACGGCGAGCTT 1228
Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088
|| |||||| | || ||| | || | ||||||||| | ||||| || ||||| || ||
Sbjct 1227 TCATGCCAAATGTATCAGCGTTCAGCTGATATGGGCTTAGGGGTGCCTTTCAATATCGCC 1168
Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTT 19133
| ||||| | || || || || | || || || || || |||
Sbjct 1167 AGTTATGCCTTGCTAACATATATGATGGCCCACGTCACTGGCCTT 1123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399208800127305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |