Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq5375 95.1 1e-14 >seq5375 Length=21980 Score = 95.1 bits (104), Expect = 1e-14 Identities = 228/345 (66%), Gaps = 0/345 (0%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || ||| | || ||| | ||||||||||||||| | ||||| || || ||||| || Sbjct 1467 GGCGACTTGGGTCCCGTCTACGGCTTCCAGTGGCGTCATTTCGGCGCCGAATACTCCAAC 1408 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 || || | ||| || ||||| | ||||| ||| || || | | || || Sbjct 1407 ATGCATGCAGATTATAGCCAACAAGGTGTGGATCAACTGGAACACATTCTCCACACCATC 1348 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 ||||| |||||||| || || ||| || || | ||||| || | | ||| Sbjct 1347 AAAACCAACCCAGATGATCGCCGCATGGTTTTAAGCGCCTGGAACCCTTGCGCCTTACCC 1288 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 ||||| ||| ||||| || ||| || |||||||| || || ||||| || | Sbjct 1287 CAAATGGCACTTCCTCCTTGCCACTGCCTAGCGCAGTTTTATGTGGCCAACGGCGAGCTT 1228 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 || |||||| | || ||| | || | ||||||||| | ||||| || ||||| || || Sbjct 1227 TCATGCCAAATGTATCAGCGTTCAGCTGATATGGGCTTAGGGGTGCCTTTCAATATCGCC 1168 Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTT 19133 | ||||| | || || || || | || || || || || ||| Sbjct 1167 AGTTATGCCTTGCTAACATATATGATGGCCCACGTCACTGGCCTT 1123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399208800127305