Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 107 2e-18
>seq5375
Length=21980
Score = 107 bits (118), Expect = 2e-18
Identities = 237/349 (68%), Gaps = 10/349 (3%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||||| |||| |||||| | ||| || || |||| || || ||||| || ||||| |||
Sbjct 1124 AGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGGC 1183
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
||||| | ||||| || | || ||||| |||| ||||| || ||||| ||| |||
Sbjct 1184 ACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGCC 1243
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|| || ||||| ||| |||||| || || || ||||| ||| | | | |||
Sbjct 1244 ACATAAAACTGCGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGGG 1303
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGA---TCTCCCCTAT 145985
||||||||| | | || | | | | || || ||||| | |||| | | ||
Sbjct 1304 TTCCAGGCGCTTAAAACCATGCGGC-GATCATCTGGGTTGGTTTTGATGGTGTGGAGAAT 1362
Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACG 146044
| ||| || || ||||| || || | ||||||| | || | || |||
Sbjct 1363 GTGTTCC---AGTTGATCCACACCTTGTTGGCTATAATCTG-CATGCATGTTGGAGTATT 1418
Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093
|||| ||||| || | ||||||||| ||||||||||| |||| ||| ||
Sbjct 1419 CGGCGCCGAAATGACGCCACTGGAAGCCGTAGACGGGACCCAAGTCGCC 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589629602921160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |