Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq4723 84.2 6e-12 >seq4723 Length=43540 Score = 84.2 bits (92), Expect = 6e-12 Identities = 127/177 (72%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 24901 CATGCTCATTCCCCCTTAACCT---TGATGCCAGCG---CGTGTGCTATATGCAGACATG 24954 ||| |||| |||||||| || | ||||||||||| | | || ||| ||| |||| Sbjct 35402 CATACTCACTCCCCCTTCACTTCGCTGATGCCAGCGGCGCACGGGCCATAGACAGCCATG 35461 Query 24955 CACTGCGTGAACCCGGATTGGTCATCTGTCTGCCCATAACTGAACCC-TGCTTTCAGGCC 25013 || ||| || || ||||| || ||||| ||| ||||| || |||| || || Sbjct 35462 GTTTGTTCGAATCCTGACTGGTCGTCGGTCTGACCAAGGCTGAAGCCATGCTGA-AGACC 35520 Query 25014 GTCACGGAATGCGCCATCCTGCAACTTGTCGTCAGTTTCAAGCTTCGCCTCCAGTTC 25070 | ||| ||||||| ||| ||||| || || | ||||| |||||||||||||| || Sbjct 35521 ATGACGAAATGCGCTATCTTGCAATTTATCTGCGGTTTCGAGCTTCGCCTCCAGCTC 35577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133299159541228