Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5375 123 2e-23 >seq5375 Length=21980 Score = 123 bits (136), Expect = 2e-23 Identities = 230/338 (68%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || |||||||| || || || || || ||| | ||||| || || ||||| || Sbjct 1467 GGCGACTTGGGTCCCGTCTACGGCTTCCAGTGGCGTCATTTCGGCGCCGAATACTCCAAC 1408 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | || ||||| |||||| || |||||| | || | || | | || Sbjct 1407 ATGCATGCAGATTATAGCCAACAAGGTGTGGATCAACTGGAACACATTCTCCACACCATC 1348 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| |||||| | || | | || ||||| ||||||||||| || | | || Sbjct 1347 AAAACCAACCCAGATGATCGCCGCATGGTTTTAAGCGCCTGGAACCCTTGCGCCTTACCC 1288 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 |||||| | ||||| || || ||| || ||||| || || || || | Sbjct 1287 CAAATGGCACTTCCTCCTTGCCACTGCCTAGCGCAGTTTTATGTGGCCAACGGCGAGCTT 1228 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || ||||||||||| || || ||||||||||| | || || ||||||||||| || Sbjct 1227 TCATGCCAAATGTATCAGCGTTCAGCTGATATGGGCTTAGGGGTGCCTTTCAATATCGCC 1168 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||||| |||| || |||||||| || || || || Sbjct 1167 AGTTATGCCTTGCTAACATATATGATGGCCCACGTCAC 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398889036580405