Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq4723 150 4e-32 >seq4723 Length=43540 Score = 150 bits (166), Expect = 4e-32 Identities = 157/194 (81%), Gaps = 14/194 (7%) Strand=Plus/Minus Query 16262 TTTTTTAAAGCGTACTTCCACCAAGAACCAGACCTAACCAACTCATTGCTGACACTCTGT 16321 |||||||||||| | | ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 33139 TTTTTTAAAGCGCATTACCACCAAGAACCAGACCCAACCAACTCATTGCTGAATATCTGT 33080 Query 16322 GGATACGGTTGTCTAGTGCGCTTTAAAAAAGAAAACCCAGCATCAATGGCTGGGCTTCGT 16381 || |||||| || |||||||||| |||||||||||||| ||| ||||||| ||||||||| Sbjct 33079 GGCTACGGTGGT-TAGTGCGCTTCAAAAAAGAAAACCC-GCA-CAATGGC-GGGCTTCGT 33024 Query 16382 G-ATATGAG---CGGCATGTATTGTTGGCGC-AATCCACGCCTGAT-TTGCTCATGAATG 16435 | | ||| | ||||| ||| |||| ||| | || |||| || |||| | ||||| Sbjct 33023 GAAAATGGGCGACGGCAAGTA--GTTGACGCTACTCGCCGCC--ATCTTGCCCGTGAATA 32968 Query 16436 CGGTCACGAACAAA 16449 ||||||||||| Sbjct 32967 GACTCACGAACAAA 32954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122340655013382