Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq44067 1712 0.0
seq4723 86.0 2e-12
>seq44067
Length=1252
Score = 1712 bits (1898), Expect = 0.0
Identities = 1129/1249 (90%), Gaps = 0/1249 (0%)
Strand=Plus/Plus
Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1 TGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCTGAT 60
Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998
|||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||||
Sbjct 61 TCGTTTGGTGGTAATCCACCGTTATATTCGTGCGGCCTGAGTGCGCTGTAATATCCAACG 120
Query 32999 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 33058
|| ||||||||||||||||||| || |||||||||||||||||||| ||| || | |
Sbjct 121 ATGTAGTCCGTTATGGCGTGAGTCGCATCGCTGAAGCTTACGTAACCTGTCACTGGTACC 180
Query 33059 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 33118
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 181 CATTCGTTCTTCAGACTCCGGAAGAAGCGTTCCATTGGGCTATTATCCCAGCAGTTTCCA 240
Query 33119 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTC 33178
||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct 241 CGCCGACTCATACTCTGTTTGATCCGGTATCGCCACAGCAACTGCCGGAACTGCCTGCTC 300
Query 33179 GTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTTTCC 33238
|||||||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||
Sbjct 301 GTATAATGACTGCCCTGATCACTGTGGAACATCACTCCGACGGGCTTACCACGCGTTTCC 360
Query 33239 CATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGCGAGAACGACATGGCCCAG 33298
||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 361 CATGCCATTTCCAGCGCCTTCATGGTGAGTCTGCTGTCCGGTGAGAACGACATTGCCCAG 420
Query 33299 CCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCC 33358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 421 CCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCCAGGTACGCCCAGCGCTTACCC 480
Query 33359 GTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGAACTGC 33418
|||||||||||||||||||| |||||||||||||| |||||||| | ||||||||||||
Sbjct 481 GTCCAGATATAGGTCACATCGCCGCACCACACCTGGTTTGGCTCTCTTACGGCGAACTGC 540
Query 33419 CTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGGTGAGTC 33478
| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 541 CGCTCAAGGTGATTAGGGATAGCAACATGTTCATGACCACCACGCTTATACCGGTGAGTT 600
Query 33479 GGCTGCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGCCTGCCAGCAAGCCAGCGTCCC 33538
|| ||||| || ||||||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct 601 GGTTGCTGGCAACTGACCAGCCCAAGCTCTTTCATTAGCCTGCCAGCGAGCCAGCGCCCC 660
Query 33539 ATCTGGTAGCCTCTCCGGGTTGCCATTGTGGCGATGCTTCTTGCTCCGGCCGAACCGTGG 33598
||||| | ||||||| | ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 661 ATCTGATGGCCTCTCTGAGTTGCCATTGTCGCGATGCTCCTTGCTCCGGCCGAACCGTGG 720
Query 33599 CTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGTTTT 33658
|||||| || |||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct 721 CTGATGTTGTGCAGCTCAAGTACCTGGCTTCGTAATACAGCCCGTCTGCCGTCTGGCTTT 780
Query 33659 TCAGGACGGTTTTTCCAGTATCTGTAGCTGCTGCGATGAACCCCGAACACATGGCAGAGT 33718
|||||||| |||||||||||| |||| || |||||||||||||||||||| ||||||||
Sbjct 781 TCAGGACGATTTTTCCAGTATTTGTAACTACTGCGATGAACCCCGAACACGTGGCAGAGA 840
Query 33719 GTGACCACAGGATAATGCGCTCTGAGTTTCCCGATTATCGAGAACTGTTCAGGGAGTCTG 33778
||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 841 GTGGCCACAGGATAACGCGCCCTGAGCTTCCCGATTATCGAGAACTGTTCAGGGAGTCTG 900
Query 33779 ACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTCTCCATTTCAATGCGTTGTAGCT 33838
|||||||||||||||||||||||||||| || || || ||||||||||| ||||| ||||
Sbjct 901 ACATCAAGAGCGCGGTAGCCTTTTTTAAAATATCGTTTTCCATTTCAATACGTTGCAGCT 960
Query 33839 TTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTT 33898
|||| || ||||| || ||||| ||||| |||||||| || || || | |||||| ||||
Sbjct 961 TTTTTCTCAGCTCGCGTATTTCGATTTGCTCCGGGGTTATCGGAGAAGATTTTGGCGTTT 1020
Query 33899 TGCCCTGACGCTCATCACGCAGTTGTTTGACCCATCTTGTCATTGTGGAAAGGCCAACAT 33958
||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||
Sbjct 1021 TGCCCTGACGCTCATCACGCAGTTGTTTGACCCATTTTGTCATCGTAGAAAGGCCAACAT 1080
Query 33959 CCATAGCTTTGGCGGCATCTGCCACCGTGTATTTCTGGTCAACAACCAGTTGAGCGGATT 34018
|||| || || || || | ||| || ||||| | ||||| |||||||| ||||||||||
Sbjct 1081 CCATGGCCTTCGCTGCTTGTGCAACTGTGTAAGTTTGGTCGACAACCAGCTGAGCGGATT 1140
Query 34019 CGCGTTTAAACTCTGCGCTAAAATTTCtttttttCATTGGAGCACCTGTGTTGTTCTGAG 34078
||||||| || || | |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1141 CGCGTTTGAATTCAGGACTAAAATTTCTTCGTTTCATTGGAGCACCTGTGTTGTTCTGAG 1200
Query 34079 GTGAGCATATCACCTCTGTTCAGGTGGCCAAATTCAGTGTGCCACTTCA 34127
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1201 ATGAGCATATCACCTCTGTTCAGGTGGCCAAATTCAGTAAACCACTTCA 1249
>seq4723
Length=43540
Score = 86.0 bits (94), Expect = 2e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 19583 TCAGCGATACGCTTCTCTGCGGCTTCCAGTTCATCAAGCAGCGCCAAGACGGTAGCCGGA 19642
|| || || ||||||||||||||||||| ||||| |||||||||| ||||| || ||
Sbjct 35681 TCTGCTATGCGCTTCTCTGCGGCTTCCATCTCATCCAGCAGCGCCAGCACGGTGGCGGGG 35740
Query 19643 TTGGCTGCGGCGATGAATTCAGCAT 19667
|| || ||||||||||| | |||||
Sbjct 35741 TTAGCCGCGGCGATGAAATTAGCAT 35765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124726136302490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |