Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 84.2 1e-11
>seq5375
Length=21980
Score = 84.2 bits (92), Expect = 1e-11
Identities = 231/348 (66%), Gaps = 7/348 (2%)
Strand=Plus/Plus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || || |||| |||||||| || || || | || |||||||| || || ||
Sbjct 1124 AGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGGC 1183
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
||||| || ||||| || | || | ||| || | || || || ||||| ||| |
Sbjct 1184 ACCCCTAAGCCCATATCAGCT-GAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGC 1242
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGG 25670
||| |||||||| | | || ||| |||||||| || || || ||| | |||
Sbjct 1243 CACATAAAACTGCGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGG 1302
Query 25671 GTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGG- 25729
||||||||||| | | |||| | || ||||||||| |||| | | | |
Sbjct 1303 GTTCCAGGCGCTTAAAACCATGCGGCGATCATCTGGGTTGGTTTTGAT--GGTGTGGAGA 1360
Query 25730 -TGTTTTGCAGCTGATCCAC-CCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 25787
||| || ||| |||||||| || | | | || ||||| ||||| | ||| ||
Sbjct 1361 ATGTGTTCCAGTTGATCCACACCTTGTTGGCTA-TAATCTGCATGCATGTTGGAGTATTC 1419
Query 25788 TGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCC 25835
|| ||||||| | ||||||||| ||||| || || || | ||| ||
Sbjct 1420 GGCGCCGAAATGACGCCACTGGAAGCCGTAGACGGGACCCAAGTCGCC 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339886266906417
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |