Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 351 6e-92
>seq9686
Length=37809
Score = 351 bits (388), Expect = 6e-92
Identities = 403/542 (74%), Gaps = 0/542 (0%)
Strand=Plus/Plus
Query 31660 ATGCTAATAGGCTATGTACGCGTATCAACAAATGAACAAAACACTGCTTTACAACGAAAC 31719
||||| || |||||||| ||||||||||||||||| || ||||| || |||||||| ||
Sbjct 27159 ATGCTGATTGGCTATGTTCGCGTATCAACAAATGACCAGAACACCGCATTACAACGGAAT 27218
Query 31720 GCTCTTGAAAGCGCAGGATGTGAGCTAATTTTTGAGGACAAGGCGAGCGGCAAAAAGGCT 31779
|| || || |||||||| ||||||||||||||||| || ||| || ||||||| | ||
Sbjct 27219 GCGCTGGAGAGCGCAGGTTGTGAGCTAATTTTTGAAGATAAGATCAGTGGCAAAACGTCT 27278
Query 31780 GAGCGCCCTGGGTTAAAAAAGGTACTCCGTATGCTTTCCAGAGGTGATACCCTGGTCGTA 31839
|| ||||| ||| | || || ||| | | ||| ||| ||||| ||||| ||
Sbjct 27279 GACCGCCCAGGGCTTAAGCGTGTGCTCAGAACGCTAGGGGAAGGAGATACGCTGGTGGTT 27338
Query 31840 TGGAAGTTAGACCGTCTTGGGCGCAGCATGCGTCACTTAGTTGTGCTGGTGGAAGAGCTG 31899
|||||||| ||||| || || ||||||||||| || | || ||||| |||||||| |||
Sbjct 27339 TGGAAGTTGGACCGGCTGGGACGCAGCATGCGACATCTTGTCGTGCTCGTGGAAGAACTG 27398
Query 31900 CGTGACAGAGGCATTAACTTCCGGAGTCTCACTGACTCCATCGACACCAGTACACCAATG 31959
||||| ||||| |||||||| ||||| || || ||| ||| || |||||||| || |||
Sbjct 27399 CGTGATAGAGGGATTAACTTTCGGAGCCTGACAGACAGCATTGATACCAGTACGCCGATG 27458
Query 31960 GGGCGCTTTTTCTTTCACGTAATGGGGGCGCTGGCAGAAATGGAACGTGAGCTTATCGTT 32019
||||| || || || || |||||||| || ||||| || ||||| || ||||| || ||
Sbjct 27459 GGGCGGTTCTTTTTCCATGTAATGGGCGCACTGGCCGAGATGGAGCGAGAGCTGATAGTC 27518
Query 32020 GAACGTACACGCGCTGGACTTGATGCAGCTCGCGCAGAAGGTCGTATAGGTGGGCGTCGG 32079
||||| || |||||||| | | || || |||||||| ||| | || || || | ||
Sbjct 27519 GAACGAACCCGCGCTGGTTTAGCAGCTGCACGCGCAGAGGGTAGGATTGGAGGCAGACGC 27578
Query 32080 CCTAAATACCAAGAAGAAACATGGCAGCAAATGCGGCGATTGCTGGAGAAGGGCATCCCC 32139
|| ||||| |||| ||| || ||| | | ||| | || ||| ||
Sbjct 27579 CCAAAATATAGCGAAGCTGAGTGGGCTCAGATGGGAAGGTTGATAGAAGGGGGAATGGAT 27638
Query 32140 CGTAAGCAGGTTGCAATCATCTATGATGTGGCTGTTTCCACGCTTTATAAGAAGTTTCCG 32199
| |||||||| ||||||||||||||||| | || || || || || ||||| |||||
Sbjct 27639 AGAAAGCAGGTGGCAATCATCTATGATGTCGGGGTATCTACTCTGTACAAGAAATTTCCC 27698
Query 32200 GC 32201
||
Sbjct 27699 GC 27700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303011134677909
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |