Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_005886.2
Length=47399
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 80.6 8e-11
>seq9686
Length=37809
Score = 80.6 bits (88), Expect = 8e-11
Identities = 165/245 (67%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 23818 AACGCGTTCATATCCTTGCCTTCGTCGGCAACGTCAAGCGATGAGAACCGCTGCCCCGTG 23877
|| |||||| | ||| ||| |||||||| ||||| | || | |||| || ||
Sbjct 7302 AAGGCGTTCTTGTCCCGGCCCTCGTCGGCGACGTCCATCGCGCCCAGTCGCTTGCCGGTT 7243
Query 23878 ACAGTAAGCCCAAGTTTCACATCCGCATCGATCGCGGCATCGATCCATTCGAGCGGGATA 23937
||| || || || | || ||||||| || || | | ||| ||| |||||
Sbjct 7242 GGTTTAATGCCCAGCTTGATATGAGCATCGACGGCAGCCTGCACCCAATCGGATGGGATC 7183
Query 23938 AGCACACCCTCAGCGGATGCGCTGTAGTCGATGTCGATTTCCTGTGCGACGACGAGCGCA 23997
|| ||||| || || ||||||||||||| | ||| | |||||| || || || | ||
Sbjct 7182 AGGACACCTTCCGCTGATGCGCTGTAGTTCAGGTCAAGTTCCTGCGCCACCACCACCGGG 7123
Query 23998 TT---GAATTTCTGTTTCTGCTTCTTATACCACTCGTCATCTTTGCGCGGATCGTCGCGC 24054
|| || ||| | || ||| ||||||||| ||||| |||||||| || | |||
Sbjct 7122 TTGTCGATTTTTTCGCACTCCTTGCGATACCACTCCTCATCCTTGCGCGGGTCATTTCGC 7063
Query 24055 CAATG 24059
|| ||
Sbjct 7062 CAGTG 7058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151446084897378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |