Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_008464.1
Length=60238
Score E
Sequences producing significant alignments: (Bits) Value
seq4723 562 1e-155
seq9686 304 5e-78
>seq4723
Length=43540
Score = 562 bits (622), Expect = 1e-155
Identities = 669/911 (73%), Gaps = 15/911 (2%)
Strand=Plus/Minus
Query 44761 TTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTT 44820
||||| |||||| |||||| || || || |||||||| || ||||| ||||| || |
Sbjct 2286 TTCATTTCCATTGTTCCCCATATGTGAAGCCGATTTCAGCAAGCGCCTCATCCATCTTCT 2227
Query 44821 CGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAACCA 44880
||||||| ||||||||||||||||||||| |||||||| || || || || || ||||
Sbjct 2226 CGATGAATTCCGGCACCATCTCGTCAAAATCAGCCATGTATTTGTCGTCACGTTCGACCA 2167
Query 44881 CGACATAATGCAGTCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCAT 44940
||||| || | ||||| || ||||| || ||||| || ||||||||| ||||||| |
Sbjct 2166 AGACATGGTGGATGCCTTCGCGTTTCATGCGTGGGTCGTAATTGGCAAAGAACCAGGCGT 2107
Query 44941 CTTTTCGCGTCACCCACATGCTGTACTGCACCTGGGCCAGGTAAGCCGATTTTATGGCCT 45000
|||| || | ||||||||||||||| |||||||||| ||| || || || |||||||
Sbjct 2106 TCTTTCCGGTAATCCACATGCTGTACTGAACCTGGGCCATGTACGCGGACTTGATGGCCT 2047
Query 45001 CGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTAAACGGGCATTTCAGTTCAA 45060
| || || || |||| |||||||||||| || |||||||| || ||||| |||||||| |
Sbjct 2046 CAAAGCCGCCAAGCCTGAATTTCATGAAGTCGCGGGAGGTGAAAGGGCACTTCAGTTCGA 1987
Query 45061 GGCCGTTGCCGTCACTGCATAAACCATCGGGAGAGCAGGCTGTACGCATACTTTCGTCGC 45120
|||| | ||| |||||| | || || ||||||||||| || |||||| | |||||||
Sbjct 1986 GGCCAAAGTCGTTACTGCACAGCCCGTCAGGAGAGCAGGCCGTGCGCATATTCTCGTCGC 1927
Query 45121 GATAGATAATCGGGGATTCAGTAACATTCACGCCGGAGGTGAACTCAAACAGGACTCTGG 45180
| ||| ||||| || || | || | ||||||| |||||||| || ||| || |
Sbjct 1926 GGAAGAGGATCGGCGACTCTATGACGGTAACGCCGGTCGTGAACTCGAAAAGGGTTCGCG 1867
Query 45181 CGTCGTTCTCGTATTGTTTTCCCCAGGCCAGTGCTTTGGCATTAACTTCCGGAGCCACAC 45240
|||| | ||| ||||||| ||||| ||||| | ||||| ||||||||||| | || |
Sbjct 1866 CGTCTTCTTCGAATTGTTTACCCCATGCCAGCGACTTGGCGTTAACTTCCGGCGATACGC 1807
Query 45241 CGGTGCAAACCTCAGCAAGCAGGGTGTGGAAGTAGGACATTTTCATGTCAGGCCATTTCT 45300
||||||| || || || ||||||||||||||||| |||||||||||||| | ||| ||||
Sbjct 1806 CGGTGCAGACTTCCGCCAGCAGGGTGTGGAAGTAAGACATTTTCATGTCCGTCCACTTCT 1747
Query 45301 TTCCTGAGCGGGGTTTTGCTATCACGTTGTGAACTTCTGAAGCTGTAAGGACGCCGAGCC 45360
| || ||||| ||||| | || |||||| ||||| || || |||| |||||||| |
Sbjct 1746 TCCCGGAGCGAGGTTTGGAAATTACGTTGCTGACTTCAGATGCCGTAATTACGCCGAGGC 1687
Query 45361 CGTATTTGTGCCACGCATCATCCCCCTGTTCGACAGCTCTCACGTCGATCCCGGTACGCT 45420
| |||||||| ||||| || || ||||| | | | ||||| || || || ||
Sbjct 1686 GCAGCCTTTGCCACGCTTCATCGCCTTGCTCGACCGTTGTTACGTCAATGCCCGTCCGGG 1627
Query 45421 GCAGGATAATGTCCGGTGTCATGCAGCCACCTTCTGTTCAGAGGCTTTCTGTTTCAGGAA 45480
||||||||| || |||||||||| || ||| ||||| || |||||
Sbjct 1626 CCAGGATAATTTCAGGTGTCATGCTGC---------------GGCCTTCTGCTTAAGGAA 1582
Query 45481 TCCAAGAGCTTTCACTGCTTCGGCCTGTGTCAGTTCTGACGATGCGCGAATGTCGCGGCG 45540
|| |||||||| || |||||| || |||| || || | ||||| ||| ||
Sbjct 1581 CCCGAGAGCTTTGACGGCTTCGATTTGGGTCAACTCGCCTGAGTCTTGAATGGTGCGACG 1522
Query 45541 AAATATCTGGGAACAGAGCGGCAATAAGTCGTCATCCCATGTTTTGTCCAGGGCAATCAG 45600
|| || | || |||||||| | | ||| ||||||| || || | || || | ||
Sbjct 1521 GAAGATTTTTGAGCAGAGCGGTAGCAGGTCTGCATCCCAGGTCTTATTCATGGTGACGAG 1462
Query 45601 CAGAGTGTTAATCTCCTGCATGGTTTCATCGTTAACCGGAGTGATGTCGCGTTCCGGCTG 45660
|| | || | || | || ||||| || |||| | | ||||||||| |||||
Sbjct 1461 CAAATCGTCGACTTCTTTCAGCGTTTCCGGTGTAGCCGGTGAAACGTCGCGTTCAGGCTG 1402
Query 45661 ACGTTCTGCAG 45671
||| || ||||
Sbjct 1401 ACGCTCGGCAG 1391
>seq9686
Length=37809
Score = 304 bits (336), Expect = 5e-78
Identities = 359/483 (74%), Gaps = 11/483 (2%)
Strand=Plus/Plus
Query 59021 ATGCGTGATATCCGGCAGGTTCTTGAGTGCTGGGGGGCATGGGCGGCAAATAACCATGAG 59080
||||| || |||| ||||| | || ||||||| || ||||| || ||||| |||||
Sbjct 159 ATGCGAGACATCCAACAGGTATTAGAACGCTGGGGAGCGTGGGCAGCCAATAATCATGAA 218
Query 59081 GATGTGACCTGGTCACCCATTGCCGCCGGATTTAAGGGACTGATCCCCGAAAAAGTAAAA 59140
||||| ||||| | || |||||||| |||||||| ||||| | || | | ||||||
Sbjct 219 GATGTTGCCTGGGCGCCGATTGCCGCTGGATTTAAAGGACTCCTTCCGGCCAGGGTAAAA 278
Query 59141 TCACGCCCGCAGTGCTGTGACGATGATGCGATGGTGATATGCGGGTGTATAGCCCGCCTT 59200
|| || || ||||| ||||| |||||||||||||| | |||||||| || ||| | ||
Sbjct 279 TCGCGGCCACAGTGTTGTGATGATGATGCGATGGTCGTCTGCGGGTGCATCGCCAGGCTG 338
Query 59201 TACCGGAACAATCGCGATCTGCATGACTTGCTGGTTGATTATTACGTGTTGGGGGAGACG 59260
|| |||||||||||| |||| || ||||||| |||||||||||| ||||| ||||
Sbjct 339 AACAAAAACAATCGCGATTTGCACGATCTGCTGGTGGATTATTACGTGATGGGGATGACG 398
Query 59261 TTCATGGCGCTGGCACGGAAACATGGGTGCTCTGACACCTGTATAGGTAAACGCCTTCAC 59320
|| ||||||||||| || || ||||| ||||| || | ||| |||||| | ||
Sbjct 399 TTTATGGCGCTGGCTCGAAAGCATGGTTGCTCAGATGGCCATATCGGTAAAAAGTTACAA 458
Query 59321 AAAGCGGAGGGGATTGTTGAAGGCATGCTGATGATGCTGGGAGTGAGGCTTGAGATGGAT 59380
||||| ||||| ||||||||||||||||||||||||| | || | || |||||||||
Sbjct 459 AAAGCCGAGGGAGTTGTTGAAGGCATGCTGATGATGCTCGATGTCCGACTGGAGATGGAT 518
Query 59381 CGGTATGTTGAGCGTGAATTGCCGGGAGGGAGAACCTCTGTATTTTATCAGCG-AAAAAA 59439
|||| ||| |||||| |||| | ||| ||| ||||| | ||||
Sbjct 519 AGGTACGTTTCCCGTGAA---CCGGAATCCAGA----CTG---GCGGCCAGCGCATAAAA 568
Query 59440 TAGTTTACGATCGTAAAAATCTGCATATCATGATAAGAGTGGTTACATTGCCACGCTGCT 59499
|||||||| |||||||| | | ||||| || |||||||||| || | | ||| |||
Sbjct 569 AAGTTTACGTACGTAAAAAACCGGATATCCTGTTAAGAGTGGTCACTTCGACACAACGCT 628
Query 59500 TAA 59502
|||
Sbjct 629 TAA 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 192501305099600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |