Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq10066 105 5e-18 >seq10066 Length=2334 Score = 105 bits (116), Expect = 5e-18 Identities = 80/92 (87%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct 629 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATGGTACGATCTAAGGAACC 570 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCG 115620 | ||||||| |||||||||||||| ||| ||| Sbjct 569 ATAACTGATTTATTGAGCCATTCGCGGTTTCG 538 Score = 105 bits (116), Expect = 5e-18 Identities = 80/92 (87%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct 629 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATGGTACGATCTAAGGAACC 570 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCG 114423 | ||||||| |||||||||||||| ||| ||| Sbjct 569 ATAACTGATTTATTGAGCCATTCGCGGTTTCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396769004264458