Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq7813 105 8e-18
seq5580 93.3 5e-14
>seq7813
Length=5936
Score = 105 bits (116), Expect = 8e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 114446 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 114505
||||| || || || || || || || || |||| ||| || |||| | || |||
Sbjct 1846 TCTTCTTTCACGAACATATTCAGAGCAATGGATGCCAAATTGCAGACAGCTATTTCGTCC 1905
Query 114506 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 114565
| | || || | |||||||||||||| ||| || | || ||||| |||| |||
Sbjct 1906 GGAGAGGAATATTCGACAATTTCCGTACACAGATTCGAGCATTTGATGGTTCCCAGGTTT 1965
Query 114566 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625
| ||||| || ||| |||||| ||||||||||| || ||||| ||||| ||||| |||
Sbjct 1966 TGCTGATTAGATTTTCGGTTACAGGCATCCTTGTAGAGGATGTAAGGCGTGCCCGTTTCC 2025
Query 114626 GTTTGGGACTTGAGAATAGCC 114646
|||||| | | |||||||
Sbjct 2026 ACTTGGGAGTCAATAATAGCC 2046
>seq5580
Length=7482
Score = 93.3 bits (102), Expect = 5e-14
Identities = 427/662 (65%), Gaps = 28/662 (4%)
Strand=Plus/Plus
Query 125773 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 125832
|||||| ||||| || ||||| || || ||| || || |||||||| || || |||||
Sbjct 5352 CTTCTCAAAGAAATTCGTCTTGCCTTCTAAGGAAATGTTTTCCATAAAGTCGAAAGGGTT 5411
Query 125833 CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAG---GAGACGATCCGAGACGTA 125889
| || || |||| |||| || | ||| || ||| || || | |||| |
Sbjct 5412 TTCGGAATTGTAAATC-TTGGGACATTGAA--GTTCGACCAAGAGCCGGTCTGCGACGAA 5468
Query 125890 CTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA-GGTTACATGGGAGCGCGT 125948
||||||||||| |||| ||| ||||||| || | | || ||| || | || |
Sbjct 5469 CTCAATGTACTGTTTCATCAAATCACAGTTCATGCCAAGCATGGCTACC-GGTAAAGCAT 5527
Query 125949 CCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG-GCGTGAATGGTGTCC 126007
| | ||| | | ||| || |||| || || || | ||| |||| | | | |
Sbjct 5528 CGGTCAAGAATTCTTGCTCTATAACCACAGCATCGCGGATGATTTGCGTAACGCGAG-CG 5586
Query 126008 ACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGACCC 126067
|| || ||| | ||| |||| ||| | | ||||| || || | ||||
Sbjct 5587 ACGCCGGGTTTGTTGACCAAATGTTTGTACATAAGGCAAGCAAAATCGCAATGCAAACCC 5646
Query 126068 TCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTC 126127
|||||||| || ||||| || || || || || || ||||| | ||| | |||||||
Sbjct 5647 TCGTCACGCGAAATGAGCTCGTTGGAAAAAGTAAGACCGGGCATCAAACCTCTCTTCTTC 5706
Query 126128 AACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCA 126187
| ||||||||| | ||| || || ||||| || || ||||| || || || ||
Sbjct 5707 AGCCAGAAAATGGAGGCAAAAGAGCCAGAGAAAAAAATACCCTCGACGGCTGCAAAGGCG 5766
Query 126188 AAGAGACGCTCAGCAAAGGAGCGCGACTTTG-TGTCA---AACCACTTCATCGCCCACTG 126243
| || ||||||||||| | || || ||||| | ||| || | ||||| |
Sbjct 5767 ATGACTCGCTCAGCAAA----ACCTGCTGTGTTGTCAGAGATCCATTTAAAGGCCCAATC 5822
Query 126244 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT-TTTCTG 126302
||||| |||| | ||| || | ||| | ||| ||| || || | ||| |||||
Sbjct 5823 GGCCTTCTTCTTTACACAAGGAAGGGTTTCGATAGCTCGGAACAG---CATCTGTTTCTC 5879
Query 126303 AT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTTC 126360
|| ||| | ||| || | || || | |||||| ||||| || | ||||
Sbjct 5880 ATCAGGAGATCGGATATAAGTGTCGATTAAAAGTGAATACATTTCGGAATGAATGTTTTC 5939
Query 126361 ATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCA 126418
|||||| ||| | |||||||| ||||||||||| | ||| || || | ||||
Sbjct 5940 --CATGGCAATCTGGAAGCCGTAGAAACAGCGCGCTTCGGGAACCTGCACTTCTTGGGCA 5997
Query 126419 AA 126420
||
Sbjct 5998 AA 5999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596900888107320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |