Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7813 100 3e-16 >seq7813 Length=5936 Score = 100 bits (110), Expect = 3e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAA 94538 || ||||| ||||| ||||| |||||| | | |||||| | ||| | || || || || Sbjct 2030 CAAGTGGAAACGGGCACGCCTTACATCCTCTACAAGGATGCCTGTAACCGAAAA-TCTAA 1972 Query 94539 CCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 ||||| |||| || ||||| ||||||||||||| || || |||||||| ||| | Sbjct 1971 TCAGCAAAACCTGGGAACCATCAAATGCTCGAATCTGTGTACGGAAATTGTCGAATATTC 1912 Query 94599 TTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 ||||||||||| || ||||| || || ||| ||||| Sbjct 1911 CTCTCCGGACGAAATAGCTGTCTGCAATTTGGCATCCAT 1873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494348267838840