Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq9686 201 3e-47 >seq9686 Length=37809 Score = 201 bits (222), Expect = 3e-47 Identities = 419/618 (68%), Gaps = 6/618 (1%) Strand=Plus/Plus Query 35057 AAACCGAGGTTTTAGATAATGGTTGTTTCCGGCCTGCATGGCATGATTTGCGC-TTTTAA 35115 ||||| | ||| ||| |||| | || |||| |||||||||| || |||| | Sbjct 27086 AAACCAACCTTTAAGAAAATGCATATTCCCGGGTCAGATGGCATGATCACGGCCTTTTGA 27145 Query 35116 ACGG-GAGATCCAGAGTGCTGATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACA 35174 | || || | ||| |||||||||||||||| | |||||||||||||||||||| || Sbjct 27146 AGGGTGAAAACCAA--TGCTGATTGGCTATGTTCGCGTATCAACAAATGACCAGAACACC 27203 Query 35175 GACCTGCAACGAAACGCTCTTGTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTA 35234 | | ||||| || || || | | ||||| ||||| | ||| ||||||||||| | Sbjct 27204 GCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGTGAGCTAATTTTTGAAGATAAGATC 27263 Query 35235 AGCGGAACAAGGACAGACAGACCTGGATTAAAACGCGCG-TTAAAGCGCCTTCAAAAAGG 35293 || || | || | | ||| | || || | || || | | | | | || || |||| Sbjct 27264 AGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGTGTGCTCAGAACG-CTAGGGGAAGG 27322 Query 35294 TGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATTTC 35353 || || ||||| || ||||| |||| || || || || |||||| |||||| | Sbjct 27323 AGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGGACGCAGCATGCGACATCTTGTCGT 27382 Query 35354 CCTCGTCGGGGAACTACGGGAGCGAGGGATTAATTTTCGCAGTCTTACCGACAGCATAGA 35413 ||||| | ||||| || || |||||||||| ||||| || || || |||||||| || Sbjct 27383 GCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTTTCGGAGCCTGACAGACAGCATTGA 27442 Query 35414 CACATCTTCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATGGA 35473 || | | || |||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 27443 TACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGTAATGGGCGCACTGGCCGAGATGGA 27502 Query 35474 ACGAGAACTAATCATCGAGCGAACGATGGCTGGACTTGCTGCCGCCAGAAATAAAGGCCG 35533 ||||| || || |||| ||||| ||||| | || || || | | || | Sbjct 27503 GCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTTAGCAGCTGCACGCGCAGAGGGTAG 27562 Query 35534 TATTGGTGGGCGACCACCTAAACTAACCAAAGCGGAATGGGAGCAGGCCGGGCGTTTATT 35593 ||||| || ||| || ||| | | |||| || |||| ||| || | || | Sbjct 27563 GATTGGAGGCAGACGCCCAAAATATAGCGAAGCTGAGTGGGCTCAGATGGGAAGGTTGAT 27622 Query 35594 AGCACAAGGAATCCCCCGCAAGCAGGTTGCATTGATCTACGATGTGGCCCTGTCAACTCT 35653 || | ||||| | |||||||| ||| | ||||| ||||| | | || ||||| Sbjct 27623 AGAAGGGGGAATGGATAGAAAGCAGGTGGCAATCATCTATGATGTCGGGGTATCTACTCT 27682 Query 35654 GTATAAAAAACACCCCGC 35671 ||| || ||| ||||| Sbjct 27683 GTACAAGAAATTTCCCGC 27700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118944701757306