Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq7813 96.9 4e-15
seq985 84.2 3e-11
>seq7813
Length=5936
Score = 96.9 bits (106), Expect = 4e-15
Identities = 188/275 (68%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 110170 ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATT 110229
|| |||||||||||| ||| |||| | || | |||| || || || |||| |
Sbjct 1756 ACTGGGTAAAAGTTGATGTCAATGATCTTGTTCAAATTCCCTGTGACGACTTTGGTGACT 1815
Query 110230 TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTT--ATTGACATATTTGGGGAGAG 110287
|| | ||| ||| | | || |||| || ||| ||| | ||||||| ||||
Sbjct 1816 TCTTTGAGCTTGACAAAGTCATACGTCTTA-TCTTCTTTCACGAACATATTC----AGAG 1870
Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347
|||| || || | |||||| |||| | ||||| || ||||| | ||||||||
Sbjct 1871 CAATGGATGCCAAATTGCAGACAGCTATTTCGTCCGGAGAGGAATATTCGACAATTTCCG 1930
Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407
|||||| || || | || ||| |||| ||| | |||||| ||||| ||| || |
Sbjct 1931 TACACAGATTCGAGCATTTGATGGTTCCCAGGTTTTGCTGATTAGATTTTCGGTTACAGG 1990
Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442
||||||| ||||| ||||| || || || ||||||
Sbjct 1991 CATCCTTGTAGAGGATGTAAGGCGTGCCCGTTTCC 2025
>seq985
Length=45870
Score = 84.2 bits (92), Expect = 3e-11
Identities = 226/346 (65%), Gaps = 0/346 (0%)
Strand=Plus/Minus
Query 167359 CCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAG 167418
|| ||||||||||| || | |||||| || | ||||| |||| | || ||||| |
Sbjct 12884 CCGGTACCAATACCATCTGCACCGTTGACAAGGACCATGGGTATGATGGGTATGTACCAA 12825
Query 167419 TCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGGGA 167478
|| |||||||| | || || ||| || ||||| ||| | |||||||| || |||
Sbjct 12824 TCAGGTTCAATCTTAAGATTGTCGTCACGCAGGTAGTGGAGTAAAGCATCATCGTTAGGA 12765
Query 167479 TCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCA 167538
| ||| | | || | | || | || ||||| || || | || | | ||
Sbjct 12764 TGGAAAATCAAACGCGTGAGTTCGGACAATTTGGTAAAAATATAACGCGGCGATGCAGCG 12705
Query 167539 TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTTA 167598
|| ||||||||| || || || ||||| |||||| |||| || | ||||| ||
Sbjct 12704 TCTTTGCCACCCTGCAGACGAGTGCCAAACTGACCAATTGGCAGCAGCAAGTTGATATTG 12645
Query 167599 TTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCG 167658
||||| ||| | | | | ||||| || | || || | | ||| |||| |||
Sbjct 12644 TTCGAGCCCACAAAGTTCTGCGCCAAGTTAATAATGGTCCCCATCAAGGAGGCTTCACCG 12585
Query 167659 TGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAA 167704
|| || ||||| | |||||| || | | |||||||| ||||
Sbjct 12584 TGATGATAAGCTGAATGTTCAGCTACCGAACCAGCCAACTGGGCAA 12539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588529637176200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |