Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq4723 168 3e-37 >seq4723 Length=43540 Score = 168 bits (186), Expect = 3e-37 Identities = 349/515 (68%), Gaps = 11/515 (2%) Strand=Plus/Plus Query 53183 ATCACTACCCGACCATGACGCTGGAGCAGCTGAAGCGCCTCCCTGTTTGGGATCTGGCCG 53242 ||||||| | ||||||| ||| | | |||||||| ||||| ||||| || |||| Sbjct 2950 ATCACTATTCCACCATGAAGCTAATCGACATCAAGCGCCTTCCTGTGTGGGAACTTGCCG 3009 Query 53243 CTGACGATTGCGTGCTCGCGATGTGGTGGGTTGGCCCGATGGAGCGCGAGGCGCGCGCAC 53302 |||| | ||||| |||||||||| ||| || | | ||||| || || Sbjct 3010 CTGAAAACGCGGTGCTGGCGATGTGGTACACCGGCACGCATAACCAGGAGGCTATCGAAC 3069 Query 53303 TGGCCGAAGCGTGGGGCTTCAAGGTCCGGAACATGAAGCTGTTCACATGGGCGAAGCTCA 53362 |||| |||||||||||||| | || || | ||||| || || |||| |||||| | Sbjct 3070 TGGCTGAAGCGTGGGGCTTTACAGTTCGAACGATGAAAGGCTTTACCTGGGTGAAGCTGA 3129 Query 53363 ACCAGATGGCCGAAC-GCGACATCACCACGGCGCTGGCCGCCGGCAAGGTGCCCGACTTC 53421 | |||| ||||||| ||| ||||| || ||||||||||| || | | | ||||| Sbjct 3130 ATCAGAACGCCGAACTGCG-CATCAACAAGGCGCTGGCCGAGGGTGAAATCACGGACTTT 3188 Query 53422 GCCGCCTTCATGCAGCTGCTGAACGACAAAACGAAGATGGGCCTCGGGAACTACACCCGC 53481 | |||| | | || || |||| | | ||| ||| | ||| ||| ||||||| Sbjct 3189 TATGACTTCCTCGATCTACTTAACGCCGAGACGCGCATGAACGGCGGCAACCACACCCGG 3248 Query 53482 GCCAACAGCGAGGACGTGCTGGTGGCCGTTCGCGGCCGTGGGCTGGAGCGGCTG---GCC 53538 ||||| | |||||| ||||| | ||| |||||| || ||||| || ||| ||| Sbjct 3249 GCCAATACAGAGGACCTGCTGATTGCCACCCGCGGCACCGGCCTGGAACGCCTGAACGCC 3308 Query 53539 GGCAACGTGAAGCAGATGGTCTACGCGCCGATCGGCCGGCACAGCGCGAAGCCTGATGAG 53598 || | | |||||| | |||||| || ||||| ||| |||| ||||| || Sbjct 3309 GGAA---TTAAGCAGGTTGTCTACAGCCCTCTCGGCGCGCATAGCGAAAAGCCGTGGGAA 3365 Query 53599 GTGCGCCAGCGCCTCGATCGCCTCTATGGCCCGGACATTTCCCGCATCGAGCTGTTCAGT 53658 || || || || || || | || || || || | | ||||| ||| ||||||| Sbjct 3366 GTTCGTCACCGACTAGAACTGCTTTACGG---TGATGTGCCACGCATTGAGTTGTTCAGC 3422 Query 53659 CGGGGCGATGCCCCCGGCTGGCACCACTGGGGCAA 53693 || | | || || ||||||||||||||||| || Sbjct 3423 CGCAGTGCGGCGCCAGGCTGGCACCACTGGGGAAA 3457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194023408442248