Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_017985.1
Length=40128
Score E
Sequences producing significant alignments: (Bits) Value
seq4723 185 2e-42
>seq4723
Length=43540
Score = 185 bits (204), Expect = 2e-42
Identities = 216/289 (75%), Gaps = 6/289 (2%)
Strand=Plus/Minus
Query 9944 TTGTGTTGATTTTTAAAGTGATTTAtttttttAAATCCTCTATGCCATACTGTTCTGAAC 10003
||| |||||||| || |||||||||||| | |||| | | | || | || ||
Sbjct 42162 TTGCGTTGATTTGTATGTTGATTTATTTTTGTG--TCCTGTTAG---TGCTATGCTCAAA 42108
Query 10004 AAAAAACGAGCGAGGA-ATCAGTGTGAAAAGTGAGGATGAGTTCTTTGCGGAGCTTCACC 10062
|||| | | ||||| || | ||| || || || || || || ||||||||||| |
Sbjct 42107 AAAACATTACCGAGGGCATGGTTATGAGTAGCGAAGAGGAATTTTTCGCGGAGCTTCATC 42048
Query 10063 CGCAGGTGGTTGAGGTTCTCGGTACTGCGCTGATGCAGGTACTGGTAGAGCAGCGCGAAC 10122
|||| | || ||| |||| || | || | |||||||| ||||| |||||||| || |
Sbjct 42047 CGCAAATAGTAGAGATTCTTGGCATAGCTGTTATGCAGGTGCTGGTTGAGCAGCGTGAGC 41988
Query 10123 CTTCGCGTGAAGCTTTGATAGAAATGATTCAGGTACTGTGGCAGGAAGAGGATGTGGACT 10182
| || | | || ||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 41987 CGTCAAGGAAGGCGCTGATAGAGATGATTCAGGTTCTGTGGCAGGAAGATGATGTGGACT 41928
Query 10183 TGGCTGTAGAACTGGCTATTGATGTTCTGACGCTGCCGAAAGAGTAGGG 10231
|||| ||||| |||||||||||||| ||| || | |||||||||||||
Sbjct 41927 TGGCAGTAGAGCTGGCTATTGATGTGCTGTCGTTATCGAAAGAGTAGGG 41879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128195636568820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |