Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq5580 145 1e-29
>seq5580
Length=7482
Score = 145 bits (160), Expect = 1e-29
Identities = 328/480 (68%), Gaps = 25/480 (5%)
Strand=Plus/Minus
Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654
|||| ||||| |||||||| ||||||||||| || || || || || || ||| |||
Sbjct 6058 ACGTTTTGGCTTTCTTTGCCGCCTCTGATGGCATTGTCAATGAAAACTTGGTGGAGCGAT 5999
Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714
| || ||||||||| || || ||||||||||| |||||||| ||||| |
Sbjct 5998 TTGCCCAAGAAGTGCAGGTTCCCGAAGCGCGCTGTTTCTACGGCTTCCAGATTGCCATGG 5939
Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACA-TTACAGACG-TCGC 25772
|||| | || || || ||||| | ||| | || || ||| ||| | || || |
Sbjct 5938 AAAACATTCATTCCGAAATGTATTCA---CTTTTAAT--CG-ACACTTATATCCGATCTC 5885
Query 25773 C----GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
| |||| | | |||||| | || ||||| | | || | | |||| |||||
Sbjct 5884 CTGATGAGAAACAGATGCTGTTCCGAGCTATCGAAACCCTTCCTTGTGTAAAGAAGAAGG 5825
Query 25829 CGCGGTGGGCCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGC-GAGCGGCTG 25884
| |||||| | || |||||| ||| | | ||| | |||| || ||||| |
Sbjct 5824 CCGATTGGGCCTTTAAATGGATCTCTGACAAC-ACAGC---AGGTTTTGCTGAGCGAGTC 5769
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||||||| || || ||||| || |||||| || || ||||| |||| ||||||
Sbjct 5768 ATCGCCTTTGCAGCCGTCGAGGGTATTTTTTTCTCTGGCTCTTTTGCCTCCATTTTCTGG 5709
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTT-CCAACGAGCTCATCAGCAGGGA 26003
|| ||| ||| || |||||||| || ||||||| ||||||||||||| | ||
Sbjct 5708 CTGAAGAAGAGAGGTTTGATGCCCGGTCT-TACTTTTTCCAACGAGCTCATTTCGCGTGA 5650
Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063
||||||| | || | |||||||| ||||| | |||| || ||| || |||||||
Sbjct 5649 CGAGGGTTTGCATTGCGATTTTGCTTGCCTTATGTACA---AACATTTGGTCAACAAACC 5593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928140863357760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |