Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_019501.1
Length=39646
Score E
Sequences producing significant alignments: (Bits) Value
seq4723 120 8e-23
>seq4723
Length=43540
Score = 120 bits (132), Expect = 8e-23
Identities = 107/129 (83%), Gaps = 5/129 (4%)
Strand=Plus/Minus
Query 15725 GACTC-AACGATGGGTTAATTCGCTCGTTGTGGTAGTGAGATGAAAAGAGGCGGCGCTTA 15783
||||| |||||||||||| | |||||| | ||||||| || ||||||||||| |
Sbjct 33491 GACTCTAACGATGGGTTACTGACTTCGTTGGCG--GTGAGAT-AAGCGAGGCGGCGCTCA 33435
Query 15784 CTACCGATTCCGCCTAGTTGGTCACTTCGACGCATCGTCTGGAACTCCAACCATCGCAGG 15843
| || || ||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct 33434 CCACTGAA-CCGCCTAGTTGGTATCTTCGACGCATCGTCTGGTACTCCAACCGTCGCAGG 33376
Query 15844 CTGAGAGGT 15852
|||||||||
Sbjct 33375 CTGAGAGGT 33367
Score = 87.8 bits (96), Expect = 5e-13
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 1474 AGTTCTGCTATGCGCTTTTTTGCTGTTTCCAGCTCGCCCAGCAGCGCCAGCACGGTAGCT 1533
|| |||||||||||||| | ||| | ||||| ||| ||||||||||||||||||| ||
Sbjct 35678 AGCTCTGCTATGCGCTTCTCTGCGGCTTCCATCTCATCCAGCAGCGCCAGCACGGTGGCG 35737
Query 1534 GTATTGGCTGCGGCGATGAATTCAGCAT 1561
| || || ||||||||||| | |||||
Sbjct 35738 GGGTTAGCCGCGGCGATGAAATTAGCAT 35765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126654347049584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |