Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq4723 120 8e-23 >seq4723 Length=43540 Score = 120 bits (132), Expect = 8e-23 Identities = 107/129 (83%), Gaps = 5/129 (4%) Strand=Plus/Minus Query 15725 GACTC-AACGATGGGTTAATTCGCTCGTTGTGGTAGTGAGATGAAAAGAGGCGGCGCTTA 15783 ||||| |||||||||||| | |||||| | ||||||| || ||||||||||| | Sbjct 33491 GACTCTAACGATGGGTTACTGACTTCGTTGGCG--GTGAGAT-AAGCGAGGCGGCGCTCA 33435 Query 15784 CTACCGATTCCGCCTAGTTGGTCACTTCGACGCATCGTCTGGAACTCCAACCATCGCAGG 15843 | || || ||||||||||||| |||||||||||||||||| ||||||||| ||||||| Sbjct 33434 CCACTGAA-CCGCCTAGTTGGTATCTTCGACGCATCGTCTGGTACTCCAACCGTCGCAGG 33376 Query 15844 CTGAGAGGT 15852 ||||||||| Sbjct 33375 CTGAGAGGT 33367 Score = 87.8 bits (96), Expect = 5e-13 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1474 AGTTCTGCTATGCGCTTTTTTGCTGTTTCCAGCTCGCCCAGCAGCGCCAGCACGGTAGCT 1533 || |||||||||||||| | ||| | ||||| ||| ||||||||||||||||||| || Sbjct 35678 AGCTCTGCTATGCGCTTCTCTGCGGCTTCCATCTCATCCAGCAGCGCCAGCACGGTGGCG 35737 Query 1534 GTATTGGCTGCGGCGATGAATTCAGCAT 1561 | || || ||||||||||| | ||||| Sbjct 35738 GGGTTAGCCGCGGCGATGAAATTAGCAT 35765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126654347049584