Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq4723 141 3e-29 >seq4723 Length=43540 Score = 141 bits (156), Expect = 3e-29 Identities = 174/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 6739 ACTGACCCCACTGAATAGCCCCAGACACCTGAGCAAGGTGAAGCAAGCCCATGTAGCTGA 6798 |||| | ||||| || ||||| ||| |||||| | || | || |||||||||||| | Sbjct 1015 ACTGGCACCACTTGATCGCCCCCGACTGCTGAGCGATATGCATCAGGCCCATGTAGCTAA 956 Query 6799 TGTCGAGATGCACAC-CT-CCATCGCGAGGCACCAGGTAGGCAAGCTTGGCCGCCGGGTT 6856 ||||||| ||| | || || | || |||||||| || |||||||| ||| ||||| Sbjct 955 TGTCGAG--GCAGATGCTGCCTTTACGTGGCACCAGATAAGCAAGCTTCTGCGCTGGGTT 898 Query 6857 CAACGTAATGCCAATGGCCGCCACGTTGATGATCGCATTCTGCGCGCTGCTAGGATTTGC 6916 | || |||||| || ||||| |||||||||||||| ||||||| ||||| | || Sbjct 897 GAGCGAAATGCCGATAGCCGCAACGTTGATGATCGCGTTCTGCGTACTGCTCTGGTTCTG 838 Query 6917 CATTGCCACCTTGGCAAGGTAATCATTCTTCTGGAATGCCTGAATGGCGAACTG 6970 | ||| || ||||| ||||| || || | || ||| ||| ||||||||||| Sbjct 837 GAATGCAACTTTGGCGAGGTAGTCGTTGCTTTGAAATAACTGGATGGCGAACTG 784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139141350312274