Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_019709.1
Length=41567
Score E
Sequences producing significant alignments: (Bits) Value
seq4723 123 7e-24
>seq4723
Length=43540
Score = 123 bits (136), Expect = 7e-24
Identities = 201/283 (71%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 26216 GCAATATGGAGCAATCCCATATAGCTGATATCAAGGCAAACCATGCCGTCGCGAGGAACC 26275
|| ||||| | || ||||| ||||| || || ||||| | |||| | || || |||
Sbjct 983 GCGATATGCATCAGGCCCATGTAGCTAATGTCGAGGCAGATGCTGCCTTTACGTGGCACC 924
Query 26276 AGATAAGCCAGTTTGCTAGCCGGGTTTAAGGTGATACCGATCGCCGCAACATTGATGATG 26335
|||||||| || || || ||||| | | || ||||| |||||||| ||||||||
Sbjct 923 AGATAAGCAAGCTTCTGCGCTGGGTTGAGCGAAATGCCGATAGCCGCAACGTTGATGATC 864
Query 26336 GCGTTCTGTGCGCTGGT-TGGATTTGCCAGTGCTGTTTTAGCCAGGTAATCGTTTTTCTG 26394
|||||||| | ||| | ||| | || | ||| ||| || ||||| ||||| | ||
Sbjct 863 GCGTTCTGCGTACTGCTCTGGTTCTGGAA-TGCAACTTTGGCGAGGTAGTCGTTGCTTTG 805
Query 26395 GAAATACTGAATTGCAAACTGGCTTTCCTTAGCCCATGTCACCGTCTGTTCAGTCAATG- 26453
|| |||| || || |||||||||||||| ||||| |||| || ||||| ||| ||
Sbjct 804 AAATAACTGGATGGCGAACTGGCTTTCCTTCGCCCA---CACCATCCGTTCA-TCAGTGG 749
Query 26454 -CTCCGCA--GAATAACTGCTCTTGCTGTTTAACGAATTCAAC 26493
| || | ||| | | |||| || ||||| | ||| |||||
Sbjct 748 CCGCCTTAATGAAAAGCGGCTCCTGTTGTTTGATGAAATCAAC 706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132797121253842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |