Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_019710.1
Length=40710
Score E
Sequences producing significant alignments: (Bits) Value
seq4723 154 4e-33
>seq4723
Length=43540
Score = 154 bits (170), Expect = 4e-33
Identities = 115/135 (85%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 24099 TTCAAATCCAGCCTGATTATCCGTTTGACCAAAACTGAAGCCATGCTGAAGACCATGACG 24158
||| ||||| | ||| | || || ||||||| ||||||||||||||||||||||||||
Sbjct 35467 TTCGAATCCTGACTGGTCGTCGGTCTGACCAAGGCTGAAGCCATGCTGAAGACCATGACG 35526
Query 24159 AAATGCGCTATCTTGCAATTTATCTGCGCTATCGAGCTTCGCTTCCAGTTCAGCGATTCG 24218
|||||||||||||||||||||||||||| | ||||||||||| ||||| ||||| ||
Sbjct 35527 AAATGCGCTATCTTGCAATTTATCTGCGGTTTCGAGCTTCGCCTCCAGCTCAGCAGACCG 35586
Query 24219 CTTCTCTGCGGCTTC 24233
| |||||||||| ||
Sbjct 35587 CCTCTCTGCGGCCTC 35601
Score = 131 bits (144), Expect = 4e-26
Identities = 205/284 (72%), Gaps = 12/284 (4%)
Strand=Plus/Minus
Query 27448 GCAATATGGAGCAATCCCATATAGCTGATATCAAGGCAAACCATGCCGTCGCGAGGAACC 27507
|| ||||| | || ||||| ||||| || || ||||| | |||| | || || |||
Sbjct 983 GCGATATGCATCAGGCCCATGTAGCTAATGTCGAGGCAGATGCTGCCTTTACGTGGCACC 924
Query 27508 AGATAAGCCAGTTTGCTG-GCAGGGTTTAAGGTGATGCCGATCGCAGCAACATTGATGAT 27566
|||||||| || || ||| || ||||| | | |||||||| || ||||| ||||||||
Sbjct 923 AGATAAGCAAGCTT-CTGCGCTGGGTTGAGCGAAATGCCGATAGCCGCAACGTTGATGAT 865
Query 27567 AGCGTTCTGTGCGCTGGT-TGGATTTGCCAGTGCCGTTTTAGCCAGGTAATCGTTTTTCT 27625
|||||||| | ||| | ||| | || | ||| ||| || ||||| ||||| | |
Sbjct 864 CGCGTTCTGCGTACTGCTCTGGTTCTGGAA-TGCAACTTTGGCGAGGTAGTCGTTGCTTT 806
Query 27626 GGAAATACTGAATTGCAAACTGGCTTTCCTTAGCCCATGTCACCGTCTGTTCAGTCAATG 27685
| || |||| || || |||||||||||||| ||||| |||| || ||||| ||| ||
Sbjct 805 GAAATAACTGGATGGCGAACTGGCTTTCCTTCGCCCA---CACCATCCGTTCA-TCAGTG 750
Query 27686 --CTCC--ACAGAATAACTGCTCCTGCTGTTTAACGAATTCAAC 27725
| || | ||| | | ||||||| ||||| | ||| |||||
Sbjct 749 GCCGCCTTAATGAAAAGCGGCTCCTGTTGTTTGATGAAATCAAC 706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130056695697856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |