Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq4723 114 3e-21 >seq4723 Length=43540 Score = 114 bits (126), Expect = 3e-21 Identities = 105/129 (81%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 34900 AACGATGGGTTAATTCGCTCGTTGTGGTAGTGAGATAAAAAGAGGCGGCGCTTACTACCG 34959 |||||||||||| | |||||| | ||||||||| ||||||||||| || || | Sbjct 33485 AACGATGGGTTACTGACTTCGTTGGCG--GTGAGATAAGC-GAGGCGGCGCTCACCACTG 33429 Query 34960 ATTCCGCCTAGTTGGTCACTTCGACGTATCGTCTGGAACTCCAACCATCGCAGGCTGAGA 35019 | ||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||| Sbjct 33428 AA-CCGCCTAGTTGGTATCTTCGACGCATCGTCTGGTACTCCAACCGTCGCAGGCTGAGA 33370 Query 35020 GGTCTGTAA 35028 ||| || || Sbjct 33369 GGTTTGCAA 33361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124671775468824