Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq9686 295 1e-75 >seq9686 Length=37809 Score = 295 bits (326), Expect = 1e-75 Identities = 316/418 (76%), Gaps = 0/418 (0%) Strand=Plus/Minus Query 27221 CGCCTGCCCCCGATGCGGCCTTTTTCCCGTGCCGCCGCCAGTCCTGCACGGGTACGCTCA 27280 || ||||| || || | || | | | ||||| || || | || || ||||| || || Sbjct 27577 CGTCTGCCTCCAATCCTACCCTCTGCGCGTGCAGCTGCTAAACCAGCGCGGGTTCGTTCG 27518 Query 27281 ACAATCAGCTCGCGCTCCATTTCCGCCAGCGCCCCCATAACATGAAAAAAGAAGCGGCCC 27340 || |||||||| |||||||| || ||||| || ||||| ||||| |||||||| || ||| Sbjct 27517 ACTATCAGCTCTCGCTCCATCTCGGCCAGTGCGCCCATTACATGGAAAAAGAACCGCCCC 27458 Query 27341 ATTGGCGTACTGGTATCAATGCTGTCGGTCAGGCTGCGGAAGTTTATTCCTTTTTCGCGC 27400 || ||||||||||||||||||||||| |||||||| || ||||| || ||| | || ||| Sbjct 27457 ATCGGCGTACTGGTATCAATGCTGTCTGTCAGGCTCCGAAAGTTAATCCCTCTATCACGC 27398 Query 27401 AGTTCCTCAGTCAGCATAACCAGATGGCGCATGCTGCGGCCAAGACGATCCAGCTTCCAC 27460 ||||| || |||| || ||||| ||||||||||| || || || |||| |||||| Sbjct 27397 AGTTCTTCCACGAGCACGACAAGATGTCGCATGCTGCGTCCCAGCCGGTCCAACTTCCAA 27338 Query 27461 ACCACCAGTGTGTCGCCTTCCTGCAGACAGCGCAGTGCTTTTTTCAGTCCCGGCCTGTCT 27520 |||||||| || || |||||| || | || | || || || || | ||| Sbjct 27337 ACCACCAGCGTATCTCCTTCCCCTAGCGTTCTGAGCACACGCTTAAGCCCTGGGCGGTCA 27278 Query 27521 GACTTTTTCCCGCTTATTCTGTCTTCAAAAATCAGTTCACAATTTGCGCTCTGCAGCGCG 27580 ||| |||| || || || | ||||||||||| || |||||| |||||||| |||||| Sbjct 27277 GACGTTTTGCCACTGATCTTATCTTCAAAAATTAGCTCACAACCTGCGCTCTCCAGCGCA 27218 Query 27581 TTACGCTGCAAATCAGTGTTCTGGTCATTTGTTGACACCCTGATATAGCCAATCAGCA 27638 || || || || | |||||||||||||||||||| || | | |||||||||||||| Sbjct 27217 TTCCGTTGTAATGCGGTGTTCTGGTCATTTGTTGATACGCGAACATAGCCAATCAGCA 27160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94415174989548