Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_019934.1
Length=39012
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 1068 0.0
>seq9686
Length=37809
Score = 1068 bits (1184), Expect = 0.0
Identities = 1769/2527 (70%), Gaps = 85/2527 (3%)
Strand=Plus/Minus
Query 26972 GCTGATTTTTTCCAGGTCATTTTTTGCCAGTAAGTTGGCATGGGCGCATTCCGTGGCCGC 27031
||||| ||| | ||||||||||| |||| | ||||| || || || || |||||
Sbjct 37801 GCTGACTTTAACGAGGTCATTTTTCGCCATGAGATTGGCGTGAGCACACTCGAACGCCGC 37742
Query 27032 AGCCAATCCGGTGGCGC--TGTTTACGTCTCGATCTGCGAAAATAATCAAATTCTTCACA 27089
||| || ||||| || || ||| ||| || ||||||| || | || ||
Sbjct 37741 CGCCTGACCCGTGGCAGAATGCTT--GTCCATATCAGCAAAAATAACCAGGTGTTTTACC 37684
Query 27090 CCTGCTGGAACACGAAATTTCTTCATGAATCCGCTGGTCATGGTGGCCCAGGTGTTAACG 27149
|| || ||| | || |||||||||||||| |||| |||| |||||||| |||||
Sbjct 37683 CCCGCCGGAGCGCGGAATTTCTTCATGAAATTGCTGTTCATCACCGCCCAGGTATTAACC 37624
Query 27150 TGGTACAGCTGCTTGCAGGAAAGAGCGGTTTCGATGCCCTCTGCAATACCCAGCGTCGTA 27209
||| | ||| | |||||| || || |||||||||||||| || || |||||||| |
Sbjct 37623 CCGTAGATCTGATAGCAGGACAGCGCCGTTTCGATGCCCTCCGCGATTCCCAGCGTTGAG 37564
Query 27210 GAAATCGGGAACATTCGGATAGCTACGGAACGCGCGTGATCCAGATAGCTTTCCTCCTGA 27269
|| | ||| ||||| ||||| ||||| || || || | || |||||| |||| |||||
Sbjct 37563 GACACCGGAAACATGCGGATGGCTACAGAGCGGGCATATTCGAGATAGTTTTCTTCCTGC 37504
Query 27270 AGAGACTTCTGGCGCTTCGCCCCGGCCGAATCTTTCAACTGAGCTTTGCGGTTTCCGTCC 27329
|| ||||||||||| || || | || |||| | |||||||| | || ||
Sbjct 37503 AGGGACTTCTGGCGTTTGGCGCTT------TCGCCCAACGGCGCTTTGCGTTCGCCTTCA 37450
Query 27330 AACAAGGTTCTGTGCAGATAGCAAAGTTCACCTTTGTCATCCGTTGCGAGCGAATACAGT 27389
| || || | ||| || ||||| | || |||||||| || || ||||| | || ||
Sbjct 37449 AGTAACGTCCGGTGGAGGTAGCACAACTCTCCTTTGTCGTCTGTGGCGAGGGCGTAGAGA 37390
Query 27390 GACTGGTAAATTTTTCCGCCGTAACGCTCCTTTTCGTTGAATCTGATGGCCTCTTGCGGA 27449
||||||| || || | | ||||| ||||||| ||| ||||| || || ||
Sbjct 37389 ACATGGTAAACCTTGCCTGCATGACGCTGCTTTTCGCAGAACCTGATCGCTTCAGCGGGT 37330
Query 27450 AGGGTATAAATCCCACGCGCAATGAGATAGTCGGCGCCCGAGGTCCCACGCAAAGGTGAC 27509
| | | ||||| ||| ||||||| | || || || ||| || ||| | |
Sbjct 37329 AATTTGTTGATCCCGCGCTGGCGGAGATAGCCAGCACCATTCGTACCAGCCAGAGGCGGC 37270
Query 27510 AGTCTCGAAAACTTGCTGAGCACCCTTTTTTGAAGGCT---GACTGCGCTACTCGTAGCC 27566
| | ||||| ||||||| |||| | | || | | ||| |||| | || |
Sbjct 37269 AACTTTGAAAATTTGCTGATTACCCGCTGGCGCAGTTTCGCGGCTGAGCTAGT--TA-CA 37213
Query 27567 GGAATTTTCAGTCGTGTGAAGGTG-TTGCCGATTAGCTCGTCGATTTCGCGGCACACCAC 27625
|| |||||| ||| ||| || ||||| | |||| ||| | |||| || | |
Sbjct 37212 GGGATTTTCTCTCGC-TGATAGTCATTGCCAAGGAGCTTGTCCACTTCGGAACAGATTGC 37154
Query 27626 GTTAAATGGTTTG---CCCTGAGTTTCGGTAATCAGCTTAAGACCGTCACCGCTGCCGCA 27682
| |||| |||| | || || ||||| |||||| | |||||||||| | |||||
Sbjct 37153 ATGGAATGCTTTGTTGCTTTGCGTCAGGGTAAGCAGCTTCATACCGTCACCGTTTCCGCA 37094
Query 27683 AGTGCAGATCCAGGTTCCGGCGCCGTCGCGGTCATCGATACGGAATTTACCGATTGAATC 27742
| || ||||| ||||||| ||||| | ||||| || ||||| || || | |
Sbjct 37093 AACACATATCCATGTTCCGGTACCGTCATGATCATCAATGCGGAACTTTCCACGGGCACT 37034
Query 27743 ACACAGCGGGCATTTCCCTTTGTAGTGGTTTTTCCCAGTGATAGGCGGCAATCCGTAGTG 27802
|| | |||||||| |||||||| ||||| ||||| ||||| || |||| |||||| |
Sbjct 37033 GCATACCGGGCATTCACCTTTGTAATGGTTCTTCCCGGTGATCGGTGGCAGTCCGTAATA 36974
Query 27803 TTCAAAAATCATCGCCCACTGGCCCTTTGC------TGCT-TCTGC-CG----TCTTCAT 27850
|| ||||| | ||| ||||| ||||| |||| ||| | || |||||
Sbjct 36973 CTCTAAAATTTCTGACCAGTGGCCTTTTGCCGCTTCTGCTGTCTTCACGCTGTTCTTCTC 36914
Query 27851 GCGCGCTTACC-----TAAATGCTGTCTGA--TTTCATTTAAATGAC-------GATTCA 27896
| || ||| ||| | || ||| ||| | ||||| | | ||
Sbjct 36913 CCAAGCGTACTGCGAATAATTTCTACCTGGCGTTTTGCATCAATGATCCTGCTGGTTGCA 36854
Query 27897 CCTGCTGAACACTT--ATCTGT-TC------TG-----GCTGAACTTCTCGCTGAGCCTT 27942
||||| | ||| | ||| | || || ||||| || || || |||
Sbjct 36853 CCTGC--ACCACCTGCATCAGCATCGAACGATGCAGGCGCTGATTTTGCCGATGG--CTT 36798
Query 27943 TTCTCTTTGTTTGGCAAAGGCAATTTGCTTGTGCTTGATGAAGTTCAATACCGCAGGAGT 28002
||| | ||| || || || ||||||| ||||| |||| || || || ||
Sbjct 36797 GTCTTTACCTTTTGCGAACCGGATCAGCTTGTGTCTGATGTAGTTGTTCACTGCGGGGGT 36738
Query 28003 AATTTCCATAGGGTAGTCGCTGAGCTCACGCGGCCAATGGCCGAAGCGTTCCCTGAAAGT 28062
||||||||| ||| | |||||||| || |||||| | | ||| ||| | | | ||
Sbjct 36737 AATTTCCATTGGGAAATCGCTGAGACCATTCGGCCATTCGTTGAATTTTTCTCGGTAGGT 36678
Query 28063 GTTTGCGCACCAGCCGTCGCTGACAGGTTTTTTCCCCTGCGAGATACGCTGACGTTGGTA 28122
| || ||||| || || |||||||||||| ||| ||| ||| || || || ||
Sbjct 36677 ATGAGCACACCACCCATCACTGACAGGTTTT---CCCATCGATGCACGGTGGCGCTGATA 36621
Query 28123 GAACTTGAGCTGGCTCCACCAGGCCTGTTTCTCGGCCTTCGTGGG---CTGTT-GCCCAT 28178
|| |||| ||| |||||||||| |||||| || | || ||| || || |||| |
Sbjct 36620 AAATTTGATCTGACTCCACCAGGACTGTTTGTCCGTTTTGGTGTAACCCTTTTCGCCCTT 36561
Query 28179 CACCTCCCAGCTTTTTGAGTTTGCGCCGCGTGTCTGTATCGACGTCATCCCCCGCCAGCG 28238
| |||||||||| || ||| |||| || || || || || || || ||||||
Sbjct 36560 ----TTTGAGCTTTTTGATATTCCGCTGCGTATCGGTTTCAACATCCTCACCGACCAGCG 36505
Query 28239 GCTTATGACCACACTTCGGGCAGACATATACGCCTGCAGGCTTCATAAAGTGGCA-CTGT 28297
||||| |||||| ||||||||||| || || |||||||| ||||| || ||||| | |
Sbjct 36504 GCTTAAAACCACATTTCGGGCAGACGTACACCCCTGCAGGTTTCATGAAATGGCATCCAT 36445
Query 28298 GAACATTCGTGTGGCAGCTTCTCTGCCCGTTCCTCAGCTACACGTCGGGCCCCTTCTTCC 28357
| ||||| | || || || || |||| |||||||||||||| || | |||| |
Sbjct 36444 GG-CATTCTTTCGGAAGTTTTTCCTCCCGATCCTCAGCTACACGGGCAGCGGCCTCTTTC 36386
Query 28358 ATCCCGTCTGATTTGCCAACA-AGATCGTCATATTCGATAGTGTCCGGAAAACCCAGTCG 28416
|| || || | ||| | | || ||| || || |||| ||| ||||| ||||| ||
Sbjct 36385 ATGCCATC-GCTTTTCGACGGGAGGTCGCTGTACTCAATAGCGTCAGGAAATCCCAGGCG 36327
Query 28417 GTGTACGGTGCCGCTGTGATCGAAGATGAGGCAGGAATCTTTACCTGGAGCGATGCGCAG 28476
|| |||||||| ||||||||||||||||| |||| |||||| ||||| || |||| ||
Sbjct 36326 ATGGACGGTGCCACTGTGATCGAAGATGAGACAGGCATCTTTGCCTGGTGCAGTGCGAAG 36267
Query 28477 GCCACGCCCGAGCGCCTGCAGCCAGCGTATTTCGCTCTTTGTTGGCCGGGCATAGATAAT 28536
||||||||| || ||||||| |||||| |||||||| || || || ||||| || || |
Sbjct 36266 GCCACGCCCCAGTGCCTGCAACCAGCGAATTTCGCTTTTGGTAGGGCGGGCGTAAATCAC 36207
Query 28537 GCAGCGAACGTCGCTGTCGAACCCAGCCACCAGCACGCCTACGCTAACGATGATTTTTGT 28596
|||||||||||| || ||||| || |||||||| || || ||||| | |||||||||||
Sbjct 36206 GCAGCGAACGTCACTATCGAAGCCCGCCACCAGTACACCGACGCTGATAATGATTTTTGT 36147
Query 28597 CGCGCCAGTCTCAAAGCGATGGATTATGGTCTGACGTTCTTCAACCGGAGTGTCGGCAGT 28656
||||||||| |||||||| ||||| || || |||||||| ||| || |||||
Sbjct 36146 CGCGCCAGTTTCAAAGCGGTGGATCATCAGTTGTCGTTCTTCGTGCGGCGTTTCGGCCAC 36087
Query 28657 CATCACCTCAGCATTAACGCCAGCCAGGTTGAACTGGATGGTCAGGTAATTGGCATGAGC 28716
||||||||| ||||| ||||| || ||||||||| || || | ||| ||||| || ||
Sbjct 36086 CATCACCTCGGCATTCACGCCCGCTTTGTTGAACTGCATCGTGACGTAGTTGGCGTGGGC 36027
Query 28717 TACATTGACGCAGAAAGCTATAGTCGGCAGATCGCGTCCATTCTCCAACCAGTTCTGGAC 28776
|||||| ||||| || | ||||| || || | || || || |||||| | |||
Sbjct 36026 CTTATTGACACAGAACGCCACTGTCGGAAGGTCCTGCCCGTTACGCAGCCAGTTATCGAC 35967
Query 28777 GATATCTCCCACCAGCGTGGAGCCGCACATAATTTCAGCCAGCTGTGCCTCGTTGTAGTC 28836
|| || || |||||| || |||||||| |||||||||| ||||||||||| ||||||
Sbjct 35966 AATGTCGCCGACCAGCTCCGATCCGCACATGATTTCAGCCAACTGTGCCTCGTCGTAGTC 35907
Query 28837 CTTGCCGTACTCAAGAGAGGATGACGTTTTAACCCCGTTAAGATCCGGCTTGGTTGGTGC 28896
|||| ||||| | || | | ||| ||||| || || ||||||||||| || || ||
Sbjct 35906 GCTGCCATACTCCATCGACGCTTTCGTCTTAACGCCTTTCAGATCCGGCTTTGTCGGGGC 35847
Query 28897 GTAAAACTCATAATTGCTCAGGTCACCGCGCTGAATCAGCTCAGCGATGGTGGTCGGTTT 28956
|| ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||||||||
Sbjct 35846 ATAGAACTCGTAATTACTCAGATCACCACGCTGGATAAGCTCGCCGATGGTGGTCGGTTT 35787
Query 28957 GATGAGTCGGTCATAGTATTTACCCAAGAACGGGGAGAACGGGGTACCCGACAGACCAAT 29016
||| || || | ||||| || |||| ||| || || |||||||| || ||||| || ||
Sbjct 35786 GATCAGGCGCTGGTAGTAATTCCCCAGGAAAGGTGAAAACGGGGTTCCGGACAGGCCTAT 35727
Query 29017 GACTTTCAC---GCCTTTAGCGCGCAGGCGATCAATGTCCTGCAGGATGCGtttttttCG 29073
|| ||| | | || | | | || ||||| || | ||| ||||| ||| ||
Sbjct 35726 AACCTTCGCTTTGGTTTCCGTGGTGATCCGCTCAATCTCTTTCAGAATGCGGCGTTTGCG 35667
Query 29074 GAGGTGCGCTTCGTCGATGATCAGGAGATCGATGTTGTCTGGGAAGACGCGGCGAATGAG 29133
|| || ||||||||||| ||||| |||||||| | | ||||| | ||||| || ||
Sbjct 35666 CAGATGGGCTTCGTCGATAATCAGCAGATCGATATCCTGCGGGAATTCCCGGCGGATCAG 35607
Query 29134 TGTATCGGCGCTGGCAATTTGAATTTTCCGAGCCGGATCGTAGTTGGGATGATCGGCCCA 29193
|| |||||||||||||| || || | | | || || ||||| || ||||| |||
Sbjct 35606 CGTGTCGGCGCTGGCAATCTGGATCTGCAGGCTGGGGTCATAGTTCGGGTGATCACGCCA 35547
Query 29194 GATATAACTAATCTCATCACCGGGCAACCCATATTCAACAAAACGATTCGCTGTCTGGCC 29253
|||| | || |||| || | || | ||||| | | |||| || | || |||||
Sbjct 35546 GATAAAGCTGATCTGGTCTTCCGGAAGGCCATACTGAGCAAAGCGCTGTGCGGTCTGATT 35487
Query 29254 AATCAGAATGGTATATGGCGCACAAAAGAGTACACGCATACCACGGCTGACGAACCCGGC 29313
||||| ||||| || || || ||| || || |||||||||||||| || | || |
Sbjct 35486 GATCAGGATGGTGTAAGGGGCGACAAACAGAACGCGCATACCACGGCTCACCAGACCATC 35427
Query 29314 GACAATGAAAGCGGCCAGCCCCGTTTTACCGCTGCCGGTCGGGGAGTACACCATGAAGGT 29373
||| ||||| |||||||| ||||| |||||||||||||| |||| |||||| |
Sbjct 35426 TGCAACAAAAGCAGCCAGCCCGGTTTTGCCGCTGCCGGTCGGCATATACATCATGAACGA 35367
Query 29374 TTCTGTA-TCCTTCCAGTTACGGCGCAGCTGGTTCAGCGCTCGTTCCTGTGCAAAATTCG 29432
||| ||| ||||||||| |||||||||| ||||||||| ||||||||||||||||| |
Sbjct 35366 TTC-GTACGCCTTCCAGTCACGGCGCAGCATGTTCAGCGCGCGTTCCTGTGCAAAATTTG 35308
Query 29433 GTGTGAT 29439
|||||||
Sbjct 35307 GTGTGAT 35301
Score = 118 bits (130), Expect = 3e-22
Identities = 119/154 (77%), Gaps = 3/154 (2%)
Strand=Plus/Minus
Query 26872 CGCATTACGCAGCCGC---CTTTTTCTTGAAGAAAACCACCTCACGAACCTGATCGCCGT 26928
||||||| || ||| | || ||||| ||||||||| ||||||||||||||| ||||
Sbjct 163 CGCATTATGCCGCCTCTCTCTGCTTCTTATAGAAAACCAGCTCACGAACCTGATCACCGT 104
Query 26929 TTATGAGCATGTCGTTAAAATCCCCGTTATCCGGGTAGTAGATGCTGATTTTTTCCAGGT 26988
| |||||||||||||| ||||| |||||||| || || | ||||| ||| | ||||
Sbjct 103 TCATGAGCATGTCGTTGAAATCACCGTTATCAGGCCAGCGTACGCTGACTTTAACGAGGT 44
Query 26989 CATTTTTTGCCAGTAAGTTGGCATGGGCGCATTC 27022
||||||| |||| | ||||| || || || ||
Sbjct 43 CATTTTTCGCCATGAGATTGGCGTGAGCACACTC 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124627007723452
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