Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq7813 93.3 2e-14 >seq7813 Length=5936 Score = 93.3 bits (102), Expect = 2e-14 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATT 26001 || || ||||||| ||| ||||||||||| | ||| || ||||||||| || ||| || Sbjct 2212 TCAGGCATCCACAGTGCGTAAAATAAATCACGCGCCCTTTGTTCTTCTTTACCAGTG-TT 2270 Query 26002 CTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061 ||| || ||||| | ||| || |||| || | |||||| ||||| ||||| |||||||| Sbjct 2271 CTTCTTGAGATCAAGGAATTCGAAAACGTCAGCGTGCCACGGTTCCAAATAAATAGCAAA 2330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252853024711175