Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1479 82.4 9e-11 >seq1479 Length=7002 Score = 82.4 bits (90), Expect = 9e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | ||| || ||||| || || || ||||||||||| || |||||| Sbjct 6342 ACTCCAATGGGGCCCATGCCCGGTCCTCCGCCGCCGTGCGGAATACAGAACGTTTTATGT 6283 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| | ||||| | ||||| |||| ||| || || || || || Sbjct 6282 AAATTGAGATGTGACACATCCGAGCCATAATCACCGGGTCGGCAAAGTCCCACTTGCGCG 6223 Query 138303 TTTAGATTTGCACCATCGAGATATACCT 138330 || | || |||||||| | ||| |||| Sbjct 6222 TTCATGTTAGCACCATCTAAATAAACCT 6195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578559598825080