Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7813 89.7 6e-13 >seq7813 Length=5936 Score = 89.7 bits (98), Expect = 6e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| ||||||| | | || || ||| || || || || || || || ||||||| Sbjct 2053 TTTGGTCGGCTATTATTGACTCCCAAGTGGAAACGGGCACGCCTTACATCCTCTACAAGG 1994 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 |||| |||||| || ||| || | || ||||||| ||||| |||| ||||| | Sbjct 1993 ATGCCTGTAACCGAAAATCTAATCAGCAAAACCTGGGAACCATCAAATGCTCGAATCTGT 1934 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 | ||||||||| | || || | | ||| || | ||||| |||||||||||||| | Sbjct 1933 GTACGGAAATTGTCGAATATTCCTCTCCGGACGAAATAGCTGTCTGCAATTTGGCATCCA 1874 Query 76056 TCGCCCT 76062 | || || Sbjct 1873 TTGCTCT 1867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596117482271520