Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_023733.1
Length=154573
Score E
Sequences producing significant alignments: (Bits) Value
seq21400 86.0 6e-12
seq5570 86.0 6e-12
seq4799 86.0 6e-12
>seq21400
Length=6845
Score = 86.0 bits (94), Expect = 6e-12
Identities = 59/66 (89%), Gaps = 3/66 (5%)
Strand=Plus/Plus
Query 94574 TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCCCGACT 94633
||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||
Sbjct 4748 TAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCAATCCCCCG--- 4804
Query 94634 CAGCTC 94639
||||||
Sbjct 4805 CAGCTC 4810
>seq5570
Length=4419
Score = 86.0 bits (94), Expect = 6e-12
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 94574 TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCCCG 94630
||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||
Sbjct 61 TAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCAATCCCCCG 5
>seq4799
Length=6538
Score = 86.0 bits (94), Expect = 6e-12
Identities = 59/66 (89%), Gaps = 3/66 (5%)
Strand=Plus/Plus
Query 94574 TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCCCGACT 94633
||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||
Sbjct 8 TAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCAATCCCCCG--- 64
Query 94634 CAGCTC 94639
||||||
Sbjct 65 CAGCTC 70
Score = 86.0 bits (94), Expect = 6e-12
Identities = 59/66 (89%), Gaps = 3/66 (5%)
Strand=Plus/Plus
Query 94574 TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCCCGACT 94633
||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||
Sbjct 187 TAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCAATCCCCCG--- 243
Query 94634 CAGCTC 94639
||||||
Sbjct 244 CAGCTC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494130832749720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |