Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1928 96.9 6e-15 >seq1928 Length=11577 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 182990 AACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGA 183049 ||||| | || | || | ||| ||||| ||| ||||| ||||| ||||| ||| ||| Sbjct 84 AACAATTAGAGGATGCCGTAACCCATGATGATCTTTGGAACGCATCCCAAATTCAGTTGA 143 Query 183050 TGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAAT 183109 || |||||| ||||||||| |||| | || ||||||||||| ||||| || | |||| Sbjct 144 CGAAAGAAGGGAAAATGCATGGTTTCATGCGCATGTACTGGGCGAAAAAAATCTTGGAAT 203 Query 183110 GGACAAGAACTCCGGAAGATGCTTTG 183135 ||||| | || || ||||| ||| Sbjct 204 GGACAGCGTCGCCAGAGGATGCGTTG 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902726538529440