Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_026014.1
Length=35814
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 203 7e-48
>seq9686
Length=37809
Score = 203 bits (224), Expect = 7e-48
Identities = 311/436 (71%), Gaps = 8/436 (2%)
Strand=Plus/Plus
Query 26941 ATGGCATGATTTACG--CTTTTGGACGG-GAGATTCAGCGTGCTGATTGGCTATGTAAGG 26997
|||||||||| ||| |||||| | || || | || |||||||||||||||| |
Sbjct 27123 ATGGCATGATC-ACGGCCTTTTGAAGGGTGAAAACCAA--TGCTGATTGGCTATGTTCGC 27179
Query 26998 GTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTTGTTTGTGCAGGATGT 27057
|||||||||||||||||||| || | | ||||| || || || | | ||||| |||
Sbjct 27180 GTATCAACAAATGACCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGT 27239
Query 27058 GAACAAATATTTGAAGATAAATTAAGCGGGACAAAGACAGACCGACCGGGATTAAAACGC 27117
|| | ||| ||||||||||| | || || | || | | ||||| || || | || ||
Sbjct 27240 GAGCTAATTTTTGAAGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGT 27299
Query 27118 G-CTTTAAAGCGCCTTCAAAAAGGTGACACGCTGGTTGTCTGGAAACTGGATCGCCTCGG 27176
| | | | || || |||| || |||||||| || ||||| |||| || || ||
Sbjct 27300 GTGCTCAGAACG-CTAGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGG 27358
Query 27177 GCGAAGCATGAAACATCTGATTTCTCTCGTCGGGGAACTACGGGAGCGAGGGATTAATTT 27236
|| |||||| |||||| | ||||| | ||||| || || |||||||||| ||
Sbjct 27359 ACGCAGCATGCGACATCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTT 27418
Query 27237 TCGCAGTCTGACCGACAGCATAGATACATCTTCTCCAATGGGGCGTTTTTTCTTCCACGT 27296
||| || ||||| |||||||| ||||| | | || |||||||| || || ||||| ||
Sbjct 27419 TCGGAGCCTGACAGACAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGT 27478
Query 27297 GATGGGTGCCCTGGCTGAAATGGAACGTGAATTAATTGTTGAACGTACACTGGCCGGACT 27356
||||| || ||||| || ||||| || || | || || ||||| || | || || |
Sbjct 27479 AATGGGCGCACTGGCCGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTT 27538
Query 27357 GGCAGCAGCGCGCGCA 27372
||||| || ||||||
Sbjct 27539 AGCAGCTGCACGCGCA 27554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114400775602048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |