Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq9686 203 7e-48 >seq9686 Length=37809 Score = 203 bits (224), Expect = 7e-48 Identities = 311/436 (71%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 26941 ATGGCATGATTTACG--CTTTTGGACGG-GAGATTCAGCGTGCTGATTGGCTATGTAAGG 26997 |||||||||| ||| |||||| | || || | || |||||||||||||||| | Sbjct 27123 ATGGCATGATC-ACGGCCTTTTGAAGGGTGAAAACCAA--TGCTGATTGGCTATGTTCGC 27179 Query 26998 GTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTTGTTTGTGCAGGATGT 27057 |||||||||||||||||||| || | | ||||| || || || | | ||||| ||| Sbjct 27180 GTATCAACAAATGACCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGT 27239 Query 27058 GAACAAATATTTGAAGATAAATTAAGCGGGACAAAGACAGACCGACCGGGATTAAAACGC 27117 || | ||| ||||||||||| | || || | || | | ||||| || || | || || Sbjct 27240 GAGCTAATTTTTGAAGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGT 27299 Query 27118 G-CTTTAAAGCGCCTTCAAAAAGGTGACACGCTGGTTGTCTGGAAACTGGATCGCCTCGG 27176 | | | | || || |||| || |||||||| || ||||| |||| || || || Sbjct 27300 GTGCTCAGAACG-CTAGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGG 27358 Query 27177 GCGAAGCATGAAACATCTGATTTCTCTCGTCGGGGAACTACGGGAGCGAGGGATTAATTT 27236 || |||||| |||||| | ||||| | ||||| || || |||||||||| || Sbjct 27359 ACGCAGCATGCGACATCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTT 27418 Query 27237 TCGCAGTCTGACCGACAGCATAGATACATCTTCTCCAATGGGGCGTTTTTTCTTCCACGT 27296 ||| || ||||| |||||||| ||||| | | || |||||||| || || ||||| || Sbjct 27419 TCGGAGCCTGACAGACAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGT 27478 Query 27297 GATGGGTGCCCTGGCTGAAATGGAACGTGAATTAATTGTTGAACGTACACTGGCCGGACT 27356 ||||| || ||||| || ||||| || || | || || ||||| || | || || | Sbjct 27479 AATGGGCGCACTGGCCGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTT 27538 Query 27357 GGCAGCAGCGCGCGCA 27372 ||||| || |||||| Sbjct 27539 AGCAGCTGCACGCGCA 27554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114400775602048