Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq14065 102 3e-18
seq1524 102 3e-18
seq20713 98.7 3e-17
seq20714 95.1 4e-16
seq20712 95.1 4e-16
>seq14065
Length=20645
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 957 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 898
Query 2825 AACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 897 GATCCCGGGTTTCGGC 882
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 756 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 697
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 696 CCGGGTTTCGGC 685
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1370 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1429
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1430 CCGGGTTTCGGC 1441
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 67 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8
Query 2829 CCGGG 2833
|||||
Sbjct 7 CCGGG 3
>seq1524
Length=14256
Score = 102 bits (112), Expect = 3e-18
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 2762 GTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
|| ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 5366 GTGTATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGG 5307
Query 2822 TTCAACCCCGGGCTTCAGC 2840
||| | |||||| ||| ||
Sbjct 5306 TTCGATCCCGGGTTTCGGC 5288
>seq20713
Length=1358
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 511 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 452
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 451 CCGGGTTTCGGC 440
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835
|||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct 1357 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 1298
Query 2836 TCAGC 2840
|| ||
Sbjct 1297 TCGGC 1293
>seq20714
Length=202
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835
|||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct 200 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 141
Query 2836 TCAGC 2840
|| ||
Sbjct 140 TCGGC 136
>seq20712
Length=20311
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835
|||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct 20311 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 20252
Query 2836 TCAGC 2840
|| ||
Sbjct 20251 TCGGC 20247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15839089659705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |